Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TTC39CQ8N584 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.94■■□□□ 1.26
TTC39CQ8N584 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TTC39CQ8N584 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TTC39CQ8N584 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TTC39CQ8N584 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TTC39CQ8N584 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.94■■□□□ 1.26
TTC39CQ8N584 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TTC39CQ8N584 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TTC39CQ8N584 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TTC39CQ8N584 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TTC39CQ8N584 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TTC39CQ8N584 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TTC39CQ8N584 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.93■■□□□ 1.26
TTC39CQ8N584 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TTC39CQ8N584 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.93■■□□□ 1.26
TTC39CQ8N584 AC123595.1-201ENST00000440769 1046 ntBASIC22.93■■□□□ 1.26
TTC39CQ8N584 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.93■■□□□ 1.26
TTC39CQ8N584 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.93■■□□□ 1.26
TTC39CQ8N584 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TTC39CQ8N584 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TTC39CQ8N584 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.93■■□□□ 1.26
TTC39CQ8N584 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TTC39CQ8N584 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TTC39CQ8N584 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
TTC39CQ8N584 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TTC39CQ8N584 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TTC39CQ8N584 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.92■■□□□ 1.26
TTC39CQ8N584 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.92■■□□□ 1.26
TTC39CQ8N584 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.92■■□□□ 1.26
TTC39CQ8N584 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TTC39CQ8N584 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TTC39CQ8N584 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TTC39CQ8N584 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.91■■□□□ 1.26
TTC39CQ8N584 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TTC39CQ8N584 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.91■■□□□ 1.26
TTC39CQ8N584 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TTC39CQ8N584 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
TTC39CQ8N584 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TTC39CQ8N584 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.91■■□□□ 1.26
TTC39CQ8N584 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TTC39CQ8N584 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.91■■□□□ 1.26
TTC39CQ8N584 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
TTC39CQ8N584 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TTC39CQ8N584 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TTC39CQ8N584 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TTC39CQ8N584 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.9■■□□□ 1.26
TTC39CQ8N584 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TTC39CQ8N584 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.9■■□□□ 1.26
TTC39CQ8N584 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TTC39CQ8N584 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.9■■□□□ 1.26
TTC39CQ8N584 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TTC39CQ8N584 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
TTC39CQ8N584 TPRG1LP1-201ENST00000598702 760 ntBASIC22.9■■□□□ 1.26
TTC39CQ8N584 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TTC39CQ8N584 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TTC39CQ8N584 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.89■■□□□ 1.26
TTC39CQ8N584 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
TTC39CQ8N584 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TTC39CQ8N584 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TTC39CQ8N584 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.89■■□□□ 1.26
TTC39CQ8N584 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TTC39CQ8N584 YBX1P1-201ENST00000445822 960 ntBASIC22.89■■□□□ 1.25
TTC39CQ8N584 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
TTC39CQ8N584 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.89■■□□□ 1.25
TTC39CQ8N584 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.89■■□□□ 1.25
TTC39CQ8N584 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TTC39CQ8N584 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.89■■□□□ 1.25
TTC39CQ8N584 MIR6084-201ENST00000622012 110 ntBASIC22.89■■□□□ 1.25
TTC39CQ8N584 AC005224.4-201ENST00000583262 1652 ntBASIC22.89■■□□□ 1.25
TTC39CQ8N584 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TTC39CQ8N584 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TTC39CQ8N584 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
TTC39CQ8N584 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
TTC39CQ8N584 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
TTC39CQ8N584 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TTC39CQ8N584 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TTC39CQ8N584 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TTC39CQ8N584 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TTC39CQ8N584 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
TTC39CQ8N584 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
TTC39CQ8N584 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
TTC39CQ8N584 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TTC39CQ8N584 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
TTC39CQ8N584 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TTC39CQ8N584 LINC02228-203ENST00000641970 1355 ntBASIC22.88■■□□□ 1.25
TTC39CQ8N584 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TTC39CQ8N584 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TTC39CQ8N584 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TTC39CQ8N584 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TTC39CQ8N584 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
TTC39CQ8N584 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.87■■□□□ 1.25
TTC39CQ8N584 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
TTC39CQ8N584 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TTC39CQ8N584 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.87■■□□□ 1.25
TTC39CQ8N584 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
TTC39CQ8N584 AP006587.3-201ENST00000525742 1516 ntBASIC22.87■■□□□ 1.25
TTC39CQ8N584 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
TTC39CQ8N584 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TTC39CQ8N584 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms