Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
ARHGEF28Q8N1W1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
ARHGEF28Q8N1W1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ARHGEF28Q8N1W1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
ARHGEF28Q8N1W1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ARHGEF28Q8N1W1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ARHGEF28Q8N1W1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC30.18■■■□□ 2.42
ARHGEF28Q8N1W1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ARHGEF28Q8N1W1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ARHGEF28Q8N1W1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC30.17■■■□□ 2.42
ARHGEF28Q8N1W1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ARHGEF28Q8N1W1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC30.17■■■□□ 2.42
ARHGEF28Q8N1W1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ARHGEF28Q8N1W1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ARHGEF28Q8N1W1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC30.17■■■□□ 2.42
ARHGEF28Q8N1W1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ARHGEF28Q8N1W1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ARHGEF28Q8N1W1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ARHGEF28Q8N1W1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC30.16■■■□□ 2.42
ARHGEF28Q8N1W1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC30.16■■■□□ 2.42
ARHGEF28Q8N1W1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC30.16■■■□□ 2.42
ARHGEF28Q8N1W1 AC231657.2-201ENST00000624556 255 ntBASIC30.16■■■□□ 2.42
ARHGEF28Q8N1W1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ARHGEF28Q8N1W1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
ARHGEF28Q8N1W1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ARHGEF28Q8N1W1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
ARHGEF28Q8N1W1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ARHGEF28Q8N1W1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
ARHGEF28Q8N1W1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC30.15■■■□□ 2.42
ARHGEF28Q8N1W1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
ARHGEF28Q8N1W1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC30.15■■■□□ 2.42
ARHGEF28Q8N1W1 FXN-202ENST00000396364 980 ntTSL 5 BASIC30.15■■■□□ 2.42
ARHGEF28Q8N1W1 AC098934.4-201ENST00000564127 592 ntBASIC30.15■■■□□ 2.42
ARHGEF28Q8N1W1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
ARHGEF28Q8N1W1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
ARHGEF28Q8N1W1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
ARHGEF28Q8N1W1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC30.14■■■□□ 2.42
ARHGEF28Q8N1W1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
ARHGEF28Q8N1W1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC30.14■■■□□ 2.41
ARHGEF28Q8N1W1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC30.13■■■□□ 2.41
ARHGEF28Q8N1W1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
ARHGEF28Q8N1W1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC30.13■■■□□ 2.41
ARHGEF28Q8N1W1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
ARHGEF28Q8N1W1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC30.13■■■□□ 2.41
ARHGEF28Q8N1W1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
ARHGEF28Q8N1W1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ARHGEF28Q8N1W1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC30.13■■■□□ 2.41
ARHGEF28Q8N1W1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
ARHGEF28Q8N1W1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC30.13■■■□□ 2.41
ARHGEF28Q8N1W1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
ARHGEF28Q8N1W1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC30.13■■■□□ 2.41
ARHGEF28Q8N1W1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
ARHGEF28Q8N1W1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
ARHGEF28Q8N1W1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
ARHGEF28Q8N1W1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
ARHGEF28Q8N1W1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
ARHGEF28Q8N1W1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC30.12■■■□□ 2.41
ARHGEF28Q8N1W1 KRT18P20-201ENST00000548986 1279 ntBASIC30.12■■■□□ 2.41
ARHGEF28Q8N1W1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC30.12■■■□□ 2.41
ARHGEF28Q8N1W1 AP001160.3-201ENST00000601484 763 ntBASIC30.12■■■□□ 2.41
ARHGEF28Q8N1W1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ARHGEF28Q8N1W1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ARHGEF28Q8N1W1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
ARHGEF28Q8N1W1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC30.11■■■□□ 2.41
ARHGEF28Q8N1W1 NFE2L3P1-201ENST00000588207 1959 ntBASIC30.11■■■□□ 2.41
ARHGEF28Q8N1W1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
ARHGEF28Q8N1W1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
ARHGEF28Q8N1W1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC30.11■■■□□ 2.41
ARHGEF28Q8N1W1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
ARHGEF28Q8N1W1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
ARHGEF28Q8N1W1 CYP2T1P-201ENST00000432607 1285 ntBASIC30.1■■■□□ 2.41
ARHGEF28Q8N1W1 AC142086.2-201ENST00000569753 217 ntBASIC30.1■■■□□ 2.41
ARHGEF28Q8N1W1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
ARHGEF28Q8N1W1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC30.1■■■□□ 2.41
ARHGEF28Q8N1W1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC30.1■■■□□ 2.41
ARHGEF28Q8N1W1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ARHGEF28Q8N1W1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ARHGEF28Q8N1W1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
ARHGEF28Q8N1W1 AC137767.1-201ENST00000602918 1920 ntBASIC30.1■■■□□ 2.41
ARHGEF28Q8N1W1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
ARHGEF28Q8N1W1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ARHGEF28Q8N1W1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC30.1■■■□□ 2.41
ARHGEF28Q8N1W1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
ARHGEF28Q8N1W1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
ARHGEF28Q8N1W1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC30.09■■■□□ 2.41
ARHGEF28Q8N1W1 ABHD17AP1-201ENST00000358206 933 ntBASIC30.09■■■□□ 2.41
ARHGEF28Q8N1W1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ARHGEF28Q8N1W1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC30.09■■■□□ 2.41
ARHGEF28Q8N1W1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
ARHGEF28Q8N1W1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC30.09■■■□□ 2.41
ARHGEF28Q8N1W1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC30.09■■■□□ 2.41
ARHGEF28Q8N1W1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC30.09■■■□□ 2.41
ARHGEF28Q8N1W1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ARHGEF28Q8N1W1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC30.08■■■□□ 2.41
ARHGEF28Q8N1W1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
ARHGEF28Q8N1W1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC30.08■■■□□ 2.41
ARHGEF28Q8N1W1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ARHGEF28Q8N1W1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
ARHGEF28Q8N1W1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ARHGEF28Q8N1W1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms