Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB43Q86YS6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB43Q86YS6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RAB43Q86YS6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB43Q86YS6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RAB43Q86YS6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RAB43Q86YS6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.49■□□□□ 0.87
RAB43Q86YS6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.49■□□□□ 0.87
RAB43Q86YS6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB43Q86YS6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB43Q86YS6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB43Q86YS6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB43Q86YS6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB43Q86YS6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB43Q86YS6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB43Q86YS6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB43Q86YS6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB43Q86YS6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RAB43Q86YS6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB43Q86YS6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB43Q86YS6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB43Q86YS6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB43Q86YS6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.48■□□□□ 0.87
RAB43Q86YS6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB43Q86YS6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB43Q86YS6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB43Q86YS6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB43Q86YS6 AC092437.1-201ENST00000624794 1048 ntBASIC20.48■□□□□ 0.87
RAB43Q86YS6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB43Q86YS6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB43Q86YS6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RAB43Q86YS6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
RAB43Q86YS6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB43Q86YS6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB43Q86YS6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
RAB43Q86YS6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RAB43Q86YS6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB43Q86YS6 AC004911.1-201ENST00000416316 871 ntBASIC20.47■□□□□ 0.87
RAB43Q86YS6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB43Q86YS6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB43Q86YS6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RAB43Q86YS6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB43Q86YS6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB43Q86YS6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB43Q86YS6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB43Q86YS6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RAB43Q86YS6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB43Q86YS6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB43Q86YS6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB43Q86YS6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB43Q86YS6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB43Q86YS6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB43Q86YS6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB43Q86YS6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB43Q86YS6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB43Q86YS6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
RAB43Q86YS6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB43Q86YS6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB43Q86YS6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB43Q86YS6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB43Q86YS6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB43Q86YS6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RAB43Q86YS6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB43Q86YS6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RAB43Q86YS6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB43Q86YS6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB43Q86YS6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB43Q86YS6 BX005040.4-201ENST00000637145 1518 ntBASIC20.45■□□□□ 0.86
RAB43Q86YS6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB43Q86YS6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB43Q86YS6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.45■□□□□ 0.86
RAB43Q86YS6 TPRG1LP1-201ENST00000598702 760 ntBASIC20.45■□□□□ 0.86
RAB43Q86YS6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB43Q86YS6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB43Q86YS6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RAB43Q86YS6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB43Q86YS6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB43Q86YS6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB43Q86YS6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB43Q86YS6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RAB43Q86YS6 AC233723.2-201ENST00000623798 2106 ntBASIC20.44■□□□□ 0.86
RAB43Q86YS6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.44■□□□□ 0.86
RAB43Q86YS6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.44■□□□□ 0.86
RAB43Q86YS6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB43Q86YS6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.44■□□□□ 0.86
RAB43Q86YS6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.44■□□□□ 0.86
RAB43Q86YS6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB43Q86YS6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RAB43Q86YS6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB43Q86YS6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB43Q86YS6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB43Q86YS6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB43Q86YS6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RAB43Q86YS6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RAB43Q86YS6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RAB43Q86YS6 ABCB10P4-201ENST00000566803 2184 ntBASIC20.44■□□□□ 0.86
RAB43Q86YS6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.43■□□□□ 0.86
RAB43Q86YS6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB43Q86YS6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB43Q86YS6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms