Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
TUBA1AQ71U36 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TUBA1AQ71U36 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1AQ71U36 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.76■□□□□ 0.75
TUBA1AQ71U36 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1AQ71U36 AC009102.2-201ENST00000606772 1639 ntBASIC19.76■□□□□ 0.75
TUBA1AQ71U36 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1AQ71U36 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
TUBA1AQ71U36 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1AQ71U36 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1AQ71U36 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TUBA1AQ71U36 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.76■□□□□ 0.75
TUBA1AQ71U36 AL136116.3-201ENST00000402907 1138 ntBASIC19.76■□□□□ 0.75
TUBA1AQ71U36 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.76■□□□□ 0.75
TUBA1AQ71U36 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TUBA1AQ71U36 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1AQ71U36 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1AQ71U36 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1AQ71U36 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
TUBA1AQ71U36 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TUBA1AQ71U36 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.75■□□□□ 0.75
TUBA1AQ71U36 AC010542.4-201ENST00000563151 1910 ntBASIC19.75■□□□□ 0.75
TUBA1AQ71U36 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1AQ71U36 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.75■□□□□ 0.75
TUBA1AQ71U36 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1AQ71U36 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.75■□□□□ 0.75
TUBA1AQ71U36 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1AQ71U36 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.75■□□□□ 0.75
TUBA1AQ71U36 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1AQ71U36 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1AQ71U36 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1AQ71U36 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBA1AQ71U36 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.74■□□□□ 0.75
TUBA1AQ71U36 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TUBA1AQ71U36 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBA1AQ71U36 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
TUBA1AQ71U36 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.74■□□□□ 0.75
TUBA1AQ71U36 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TUBA1AQ71U36 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBA1AQ71U36 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBA1AQ71U36 LINC01521-201ENST00000504184 1943 ntBASIC19.74■□□□□ 0.75
TUBA1AQ71U36 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
TUBA1AQ71U36 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBA1AQ71U36 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBA1AQ71U36 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBA1AQ71U36 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBA1AQ71U36 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBA1AQ71U36 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.73■□□□□ 0.75
TUBA1AQ71U36 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TUBA1AQ71U36 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TUBA1AQ71U36 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.73■□□□□ 0.75
TUBA1AQ71U36 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBA1AQ71U36 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
TUBA1AQ71U36 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBA1AQ71U36 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.73■□□□□ 0.75
TUBA1AQ71U36 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
TUBA1AQ71U36 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBA1AQ71U36 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBA1AQ71U36 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TUBA1AQ71U36 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBA1AQ71U36 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.72■□□□□ 0.75
TUBA1AQ71U36 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBA1AQ71U36 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBA1AQ71U36 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.72■□□□□ 0.75
TUBA1AQ71U36 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBA1AQ71U36 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBA1AQ71U36 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBA1AQ71U36 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBA1AQ71U36 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TUBA1AQ71U36 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBA1AQ71U36 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.71■□□□□ 0.75
TUBA1AQ71U36 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.71■□□□□ 0.75
TUBA1AQ71U36 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TUBA1AQ71U36 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBA1AQ71U36 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBA1AQ71U36 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBA1AQ71U36 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TUBA1AQ71U36 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.71■□□□□ 0.74
TUBA1AQ71U36 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.7■□□□□ 0.74
TUBA1AQ71U36 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TUBA1AQ71U36 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.7■□□□□ 0.74
TUBA1AQ71U36 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.7■□□□□ 0.74
TUBA1AQ71U36 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
TUBA1AQ71U36 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBA1AQ71U36 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TUBA1AQ71U36 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBA1AQ71U36 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TUBA1AQ71U36 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TUBA1AQ71U36 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.7■□□□□ 0.74
TUBA1AQ71U36 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBA1AQ71U36 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.7■□□□□ 0.74
TUBA1AQ71U36 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TUBA1AQ71U36 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TUBA1AQ71U36 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms