Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00575Q6W349 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00575Q6W349 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
LINC00575Q6W349 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00575Q6W349 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00575Q6W349 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
LINC00575Q6W349 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LINC00575Q6W349 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00575Q6W349 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00575Q6W349 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00575Q6W349 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00575Q6W349 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00575Q6W349 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00575Q6W349 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00575Q6W349 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00575Q6W349 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00575Q6W349 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
LINC00575Q6W349 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
LINC00575Q6W349 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00575Q6W349 RARG-204ENST00000543726 1779 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00575Q6W349 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00575Q6W349 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00575Q6W349 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00575Q6W349 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00575Q6W349 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00575Q6W349 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00575Q6W349 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00575Q6W349 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC13.62□□□□□ -0.23
LINC00575Q6W349 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LINC00575Q6W349 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00575Q6W349 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00575Q6W349 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LINC00575Q6W349 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00575Q6W349 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00575Q6W349 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00575Q6W349 MIR6765-201ENST00000614092 87 ntBASIC13.62□□□□□ -0.23
LINC00575Q6W349 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
LINC00575Q6W349 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00575Q6W349 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00575Q6W349 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00575Q6W349 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00575Q6W349 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00575Q6W349 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00575Q6W349 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00575Q6W349 FEM1AP1-201ENST00000431297 1995 ntBASIC13.62□□□□□ -0.23
LINC00575Q6W349 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00575Q6W349 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00575Q6W349 FP325331.1-202ENST00000623531 1380 ntBASIC13.61□□□□□ -0.23
LINC00575Q6W349 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00575Q6W349 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00575Q6W349 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 ABHD17AP4-201ENST00000411545 909 ntBASIC13.61□□□□□ -0.23
LINC00575Q6W349 SPCS2P3-201ENST00000500401 656 ntBASIC13.61□□□□□ -0.23
LINC00575Q6W349 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LINC00575Q6W349 AC009086.3-201ENST00000623486 1008 ntBASIC13.61□□□□□ -0.23
LINC00575Q6W349 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00575Q6W349 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00575Q6W349 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00575Q6W349 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00575Q6W349 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00575Q6W349 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00575Q6W349 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LINC00575Q6W349 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00575Q6W349 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00575Q6W349 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC00575Q6W349 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC00575Q6W349 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00575Q6W349 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00575Q6W349 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
LINC00575Q6W349 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LINC00575Q6W349 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00575Q6W349 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC00575Q6W349 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00575Q6W349 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00575Q6W349 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
LINC00575Q6W349 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00575Q6W349 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC00575Q6W349 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC00575Q6W349 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00575Q6W349 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00575Q6W349 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00575Q6W349 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms