Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PACS1Q6VY07 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PACS1Q6VY07 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.74■■□□□ 1.07
PACS1Q6VY07 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PACS1Q6VY07 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.74■■□□□ 1.07
PACS1Q6VY07 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
PACS1Q6VY07 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.74■■□□□ 1.07
PACS1Q6VY07 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PACS1Q6VY07 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PACS1Q6VY07 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PACS1Q6VY07 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PACS1Q6VY07 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PACS1Q6VY07 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PACS1Q6VY07 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.73■■□□□ 1.07
PACS1Q6VY07 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PACS1Q6VY07 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PACS1Q6VY07 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PACS1Q6VY07 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.73■■□□□ 1.07
PACS1Q6VY07 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.73■■□□□ 1.07
PACS1Q6VY07 AL136162.1-201ENST00000607711 1078 ntBASIC21.73■■□□□ 1.07
PACS1Q6VY07 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
PACS1Q6VY07 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PACS1Q6VY07 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PACS1Q6VY07 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PACS1Q6VY07 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PACS1Q6VY07 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PACS1Q6VY07 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PACS1Q6VY07 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PACS1Q6VY07 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PACS1Q6VY07 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.72■■□□□ 1.07
PACS1Q6VY07 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PACS1Q6VY07 AC096631.2-201ENST00000436136 790 ntBASIC21.72■■□□□ 1.07
PACS1Q6VY07 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.72■■□□□ 1.07
PACS1Q6VY07 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PACS1Q6VY07 AL031602.1-201ENST00000633169 911 ntBASIC21.72■■□□□ 1.07
PACS1Q6VY07 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PACS1Q6VY07 AC135279.3-201ENST00000610945 1311 ntBASIC21.72■■□□□ 1.07
PACS1Q6VY07 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PACS1Q6VY07 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PACS1Q6VY07 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PACS1Q6VY07 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PACS1Q6VY07 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PACS1Q6VY07 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PACS1Q6VY07 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PACS1Q6VY07 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PACS1Q6VY07 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.71■■□□□ 1.07
PACS1Q6VY07 AC024257.2-201ENST00000549699 147 ntBASIC21.71■■□□□ 1.07
PACS1Q6VY07 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PACS1Q6VY07 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PACS1Q6VY07 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.71■■□□□ 1.07
PACS1Q6VY07 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PACS1Q6VY07 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PACS1Q6VY07 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PACS1Q6VY07 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.7■■□□□ 1.06
PACS1Q6VY07 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PACS1Q6VY07 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PACS1Q6VY07 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.7■■□□□ 1.06
PACS1Q6VY07 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.7■■□□□ 1.06
PACS1Q6VY07 MIR4767-201ENST00000582827 78 ntBASIC21.7■■□□□ 1.06
PACS1Q6VY07 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.7■■□□□ 1.06
PACS1Q6VY07 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PACS1Q6VY07 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PACS1Q6VY07 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.7■■□□□ 1.06
PACS1Q6VY07 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PACS1Q6VY07 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PACS1Q6VY07 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PACS1Q6VY07 AC244015.2-201ENST00000616358 1861 ntBASIC21.69■■□□□ 1.06
PACS1Q6VY07 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.69■■□□□ 1.06
PACS1Q6VY07 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.69■■□□□ 1.06
PACS1Q6VY07 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PACS1Q6VY07 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PACS1Q6VY07 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PACS1Q6VY07 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.69■■□□□ 1.06
PACS1Q6VY07 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.69■■□□□ 1.06
PACS1Q6VY07 AC110285.6-201ENST00000617652 491 ntBASIC21.69■■□□□ 1.06
PACS1Q6VY07 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PACS1Q6VY07 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PACS1Q6VY07 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PACS1Q6VY07 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.69■■□□□ 1.06
PACS1Q6VY07 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.69■■□□□ 1.06
PACS1Q6VY07 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.69■■□□□ 1.06
PACS1Q6VY07 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.68■■□□□ 1.06
PACS1Q6VY07 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.68■■□□□ 1.06
PACS1Q6VY07 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PACS1Q6VY07 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PACS1Q6VY07 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.68■■□□□ 1.06
PACS1Q6VY07 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.68■■□□□ 1.06
PACS1Q6VY07 AC106739.1-201ENST00000617035 715 ntBASIC21.68■■□□□ 1.06
PACS1Q6VY07 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PACS1Q6VY07 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PACS1Q6VY07 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PACS1Q6VY07 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PACS1Q6VY07 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PACS1Q6VY07 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS1Q6VY07 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS1Q6VY07 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.67■■□□□ 1.06
PACS1Q6VY07 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.67■■□□□ 1.06
PACS1Q6VY07 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.67■■□□□ 1.06
PACS1Q6VY07 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PACS1Q6VY07 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms