Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNIP4Q6PIL6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNIP4Q6PIL6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNIP4Q6PIL6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNIP4Q6PIL6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
KCNIP4Q6PIL6 AL022069.1-201ENST00000568025 1636 ntBASIC16.66■□□□□ 0.26
KCNIP4Q6PIL6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNIP4Q6PIL6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNIP4Q6PIL6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNIP4Q6PIL6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNIP4Q6PIL6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNIP4Q6PIL6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 AC022413.1-201ENST00000624602 984 ntBASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
KCNIP4Q6PIL6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
KCNIP4Q6PIL6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 KRT18P10-201ENST00000388836 1287 ntBASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 ALDH1A3-203ENST00000557963 1670 ntBASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNIP4Q6PIL6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNIP4Q6PIL6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KCNIP4Q6PIL6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 Z98882.1-201ENST00000622160 2253 ntBASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KCNIP4Q6PIL6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms