Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 SRD5A1P1-201ENST00000442297 786 ntBASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
TMEM53Q6P2H8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 AL512631.2-201ENST00000604634 923 ntBASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 AC241377.3-202ENST00000626088 1088 ntBASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 AC241585.3-202ENST00000628937 1088 ntBASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 AC245100.8-202ENST00000629247 1058 ntBASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM53Q6P2H8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 AC026471.1-201ENST00000564629 3026 ntBASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 LINC01529-204ENST00000636474 1715 ntBASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM53Q6P2H8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM53Q6P2H8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM53Q6P2H8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM53Q6P2H8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM53Q6P2H8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 AC131281.2-201ENST00000520478 145 ntBASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 AC092171.4-201ENST00000609130 632 ntBASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TMEM53Q6P2H8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TMEM53Q6P2H8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM53Q6P2H8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM53Q6P2H8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM53Q6P2H8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM53Q6P2H8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM53Q6P2H8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM53Q6P2H8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM53Q6P2H8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms