Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DEPDC1Q5TB30 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DEPDC1Q5TB30 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 AC096631.2-201ENST00000436136 790 ntBASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 SLC47A1P1-202ENST00000449666 945 ntBASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 MIR4767-201ENST00000582827 78 ntBASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DEPDC1Q5TB30 AC135279.3-201ENST00000610945 1311 ntBASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 AC092053.2-201ENST00000640557 1818 ntBASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.78■□□□□ 0.92
DEPDC1Q5TB30 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 AC087239.1-201ENST00000622671 572 ntBASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DEPDC1Q5TB30 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
DEPDC1Q5TB30 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
DEPDC1Q5TB30 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 BX842568.3-201ENST00000418104 571 ntBASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 AC010141.3-201ENST00000456659 717 ntBASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 AP005435.1-201ENST00000529293 1178 ntBASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 AC079089.2-201ENST00000531211 1277 ntBASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEPDC1Q5TB30 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 PBX2P1-201ENST00000493219 1291 ntBASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
DEPDC1Q5TB30 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
DEPDC1Q5TB30 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.74■□□□□ 0.91
DEPDC1Q5TB30 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
DEPDC1Q5TB30 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DEPDC1Q5TB30 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
DEPDC1Q5TB30 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DEPDC1Q5TB30 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.74■□□□□ 0.91
DEPDC1Q5TB30 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms