Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D28Q2M2D7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TBC1D28Q2M2D7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D28Q2M2D7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TBC1D28Q2M2D7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D28Q2M2D7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TBC1D28Q2M2D7 ECEL1P1-201ENST00000373592 1742 ntBASIC18.71■□□□□ 0.59
TBC1D28Q2M2D7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D28Q2M2D7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TBC1D28Q2M2D7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TBC1D28Q2M2D7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D28Q2M2D7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
TBC1D28Q2M2D7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D28Q2M2D7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 AC092053.2-201ENST00000640557 1818 ntBASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 AP004607.7-201ENST00000527152 1677 ntBASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.69■□□□□ 0.58
TBC1D28Q2M2D7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D28Q2M2D7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 BX005040.4-201ENST00000637145 1518 ntBASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TBC1D28Q2M2D7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.66■□□□□ 0.58
TBC1D28Q2M2D7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms