Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.68■■□□□ 1.06
NUBP1P53384 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NUBP1P53384 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.68■■□□□ 1.06
NUBP1P53384 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.68■■□□□ 1.06
NUBP1P53384 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUBP1P53384 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NUBP1P53384 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.68■■□□□ 1.06
NUBP1P53384 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.68■■□□□ 1.06
NUBP1P53384 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.68■■□□□ 1.06
NUBP1P53384 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUBP1P53384 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUBP1P53384 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUBP1P53384 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUBP1P53384 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NUBP1P53384 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUBP1P53384 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.67■■□□□ 1.06
NUBP1P53384 AC055733.4-201ENST00000638462 1354 ntBASIC21.67■■□□□ 1.06
NUBP1P53384 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUBP1P53384 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NUBP1P53384 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NUBP1P53384 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.67■■□□□ 1.06
NUBP1P53384 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUBP1P53384 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.67■■□□□ 1.06
NUBP1P53384 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.67■■□□□ 1.06
NUBP1P53384 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.67■■□□□ 1.06
NUBP1P53384 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.67■■□□□ 1.06
NUBP1P53384 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NUBP1P53384 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NUBP1P53384 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUBP1P53384 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.66■■□□□ 1.06
NUBP1P53384 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NUBP1P53384 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NUBP1P53384 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.66■■□□□ 1.06
NUBP1P53384 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUBP1P53384 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NUBP1P53384 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.66■■□□□ 1.06
NUBP1P53384 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.66■■□□□ 1.06
NUBP1P53384 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC21.66■■□□□ 1.06
NUBP1P53384 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.66■■□□□ 1.06
NUBP1P53384 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUBP1P53384 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NUBP1P53384 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUBP1P53384 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.65■■□□□ 1.06
NUBP1P53384 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUBP1P53384 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUBP1P53384 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUBP1P53384 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NUBP1P53384 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUBP1P53384 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUBP1P53384 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUBP1P53384 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUBP1P53384 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUBP1P53384 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUBP1P53384 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC21.65■■□□□ 1.06
NUBP1P53384 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.65■■□□□ 1.06
NUBP1P53384 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NUBP1P53384 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.65■■□□□ 1.06
NUBP1P53384 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
NUBP1P53384 FAM197Y4-202ENST00000622692 608 ntBASIC21.65■■□□□ 1.06
NUBP1P53384 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.65■■□□□ 1.06
NUBP1P53384 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.65■■□□□ 1.06
NUBP1P53384 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUBP1P53384 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NUBP1P53384 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NUBP1P53384 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
NUBP1P53384 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NUBP1P53384 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NUBP1P53384 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NUBP1P53384 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NUBP1P53384 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.64■■□□□ 1.05
NUBP1P53384 KRT18P21-201ENST00000515767 1272 ntBASIC21.64■■□□□ 1.05
NUBP1P53384 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NUBP1P53384 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.64■■□□□ 1.05
NUBP1P53384 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.64■■□□□ 1.05
NUBP1P53384 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NUBP1P53384 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.64■■□□□ 1.05
NUBP1P53384 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NUBP1P53384 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NUBP1P53384 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NUBP1P53384 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NUBP1P53384 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NUBP1P53384 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NUBP1P53384 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NUBP1P53384 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NUBP1P53384 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NUBP1P53384 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.63■■□□□ 1.05
NUBP1P53384 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.63■■□□□ 1.05
NUBP1P53384 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.63■■□□□ 1.05
NUBP1P53384 RN7SL275P-201ENST00000582762 335 ntBASIC21.63■■□□□ 1.05
NUBP1P53384 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NUBP1P53384 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NUBP1P53384 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NUBP1P53384 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NUBP1P53384 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NUBP1P53384 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NUBP1P53384 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NUBP1P53384 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
NUBP1P53384 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NUBP1P53384 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NUBP1P53384 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms