Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT20P35900 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT20P35900 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
KRT20P35900 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT20P35900 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT20P35900 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.38■□□□□ 0.85
KRT20P35900 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT20P35900 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT20P35900 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT20P35900 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KRT20P35900 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KRT20P35900 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT20P35900 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT20P35900 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
KRT20P35900 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT20P35900 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT20P35900 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
KRT20P35900 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT20P35900 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT20P35900 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT20P35900 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT20P35900 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT20P35900 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT20P35900 AC136469.2-201ENST00000623944 1028 ntBASIC20.37■□□□□ 0.85
KRT20P35900 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT20P35900 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
KRT20P35900 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT20P35900 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT20P35900 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT20P35900 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT20P35900 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT20P35900 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
KRT20P35900 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT20P35900 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT20P35900 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.36■□□□□ 0.85
KRT20P35900 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT20P35900 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT20P35900 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.36■□□□□ 0.85
KRT20P35900 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT20P35900 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT20P35900 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT20P35900 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT20P35900 PBX2P1-201ENST00000493219 1291 ntBASIC20.36■□□□□ 0.85
KRT20P35900 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.36■□□□□ 0.85
KRT20P35900 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.36■□□□□ 0.85
KRT20P35900 FBXW4P1-201ENST00000426721 2239 ntBASIC20.36■□□□□ 0.85
KRT20P35900 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT20P35900 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
KRT20P35900 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT20P35900 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT20P35900 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT20P35900 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT20P35900 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT20P35900 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
KRT20P35900 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
KRT20P35900 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT20P35900 SLC25A24-204ENST00000569674 2357 ntBASIC20.35■□□□□ 0.85
KRT20P35900 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT20P35900 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT20P35900 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT20P35900 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT20P35900 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.35■□□□□ 0.85
KRT20P35900 AC024257.2-201ENST00000549699 147 ntBASIC20.35■□□□□ 0.85
KRT20P35900 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT20P35900 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT20P35900 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT20P35900 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT20P35900 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT20P35900 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT20P35900 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT20P35900 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT20P35900 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT20P35900 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KRT20P35900 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT20P35900 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT20P35900 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT20P35900 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT20P35900 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.34■□□□□ 0.85
KRT20P35900 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT20P35900 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT20P35900 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
KRT20P35900 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT20P35900 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KRT20P35900 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT20P35900 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT20P35900 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.33■□□□□ 0.85
KRT20P35900 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KRT20P35900 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.33■□□□□ 0.84
KRT20P35900 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
KRT20P35900 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KRT20P35900 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRT20P35900 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
KRT20P35900 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT20P35900 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT20P35900 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT20P35900 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT20P35900 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
KRT20P35900 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT20P35900 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT20P35900 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms