Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC27.34■■□□□ 1.97
RFC4P35249 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC27.34■■□□□ 1.97
RFC4P35249 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC27.34■■□□□ 1.97
RFC4P35249 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC27.34■■□□□ 1.97
RFC4P35249 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.34■■□□□ 1.97
RFC4P35249 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
RFC4P35249 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC27.33■■□□□ 1.97
RFC4P35249 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RFC4P35249 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
RFC4P35249 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RFC4P35249 CYP2T1P-201ENST00000432607 1285 ntBASIC27.33■■□□□ 1.97
RFC4P35249 MARS-234ENST00000630571 216 ntTSL 5 BASIC27.33■■□□□ 1.97
RFC4P35249 MARS-235ENST00000630803 183 ntTSL 3 BASIC27.33■■□□□ 1.97
RFC4P35249 ABCB10P4-201ENST00000566803 2184 ntBASIC27.33■■□□□ 1.97
RFC4P35249 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RFC4P35249 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
RFC4P35249 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
RFC4P35249 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.32■■□□□ 1.96
RFC4P35249 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RFC4P35249 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RFC4P35249 BET1L-204ENST00000410108 637 ntTSL 3 BASIC27.32■■□□□ 1.96
RFC4P35249 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
RFC4P35249 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RFC4P35249 PHB2-213ENST00000546111 858 ntTSL 2 BASIC27.32■■□□□ 1.96
RFC4P35249 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC27.32■■□□□ 1.96
RFC4P35249 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC27.32■■□□□ 1.96
RFC4P35249 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC27.32■■□□□ 1.96
RFC4P35249 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RFC4P35249 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RFC4P35249 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC27.32■■□□□ 1.96
RFC4P35249 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RFC4P35249 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.32■■□□□ 1.96
RFC4P35249 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
RFC4P35249 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RFC4P35249 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
RFC4P35249 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.31■■□□□ 1.96
RFC4P35249 SLC7A5P1-201ENST00000568957 537 ntBASIC27.31■■□□□ 1.96
RFC4P35249 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
RFC4P35249 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.31■■□□□ 1.96
RFC4P35249 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.3■■□□□ 1.96
RFC4P35249 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RFC4P35249 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
RFC4P35249 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.3■■□□□ 1.96
RFC4P35249 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RFC4P35249 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC27.3■■□□□ 1.96
RFC4P35249 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RFC4P35249 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC27.3■■□□□ 1.96
RFC4P35249 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC27.3■■□□□ 1.96
RFC4P35249 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.3■■□□□ 1.96
RFC4P35249 AC079089.2-201ENST00000531211 1277 ntBASIC27.3■■□□□ 1.96
RFC4P35249 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC27.3■■□□□ 1.96
RFC4P35249 AP004607.7-201ENST00000527152 1677 ntBASIC27.3■■□□□ 1.96
RFC4P35249 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RFC4P35249 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
RFC4P35249 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
RFC4P35249 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC27.29■■□□□ 1.96
RFC4P35249 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC27.29■■□□□ 1.96
RFC4P35249 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC27.29■■□□□ 1.96
RFC4P35249 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
RFC4P35249 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RFC4P35249 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RFC4P35249 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
RFC4P35249 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
RFC4P35249 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
RFC4P35249 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RFC4P35249 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RFC4P35249 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27.28■■□□□ 1.96
RFC4P35249 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC27.28■■□□□ 1.96
RFC4P35249 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC27.28■■□□□ 1.96
RFC4P35249 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC27.28■■□□□ 1.96
RFC4P35249 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RFC4P35249 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC27.28■■□□□ 1.96
RFC4P35249 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC27.28■■□□□ 1.96
RFC4P35249 OR10C1-204ENST00000622521 1039 ntBASIC27.28■■□□□ 1.96
RFC4P35249 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC27.28■■□□□ 1.96
RFC4P35249 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
RFC4P35249 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.28■■□□□ 1.96
RFC4P35249 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RFC4P35249 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
RFC4P35249 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.27■■□□□ 1.96
RFC4P35249 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RFC4P35249 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC27.27■■□□□ 1.96
RFC4P35249 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RFC4P35249 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
RFC4P35249 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RFC4P35249 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.27■■□□□ 1.96
RFC4P35249 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RFC4P35249 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RFC4P35249 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
RFC4P35249 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RFC4P35249 NAA20-201ENST00000310450 920 ntTSL 2 BASIC27.26■■□□□ 1.95
RFC4P35249 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RFC4P35249 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RFC4P35249 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RFC4P35249 AC020928.2-201ENST00000588717 2197 ntBASIC27.26■■□□□ 1.95
RFC4P35249 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
RFC4P35249 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.25■■□□□ 1.95
RFC4P35249 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.25■■□□□ 1.95
RFC4P35249 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RFC4P35249 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms