Protein–RNA interactions for Protein: P33991

MCM4, DNA replication licensing factor MCM4, humanhuman

Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4P33991 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
MCM4P33991 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
MCM4P33991 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
MCM4P33991 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MCM4P33991 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MCM4P33991 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
MCM4P33991 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.31■■□□□ 1.64
MCM4P33991 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
MCM4P33991 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MCM4P33991 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MCM4P33991 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
MCM4P33991 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
MCM4P33991 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
MCM4P33991 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.31■■□□□ 1.64
MCM4P33991 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
MCM4P33991 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MCM4P33991 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MCM4P33991 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MCM4P33991 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
MCM4P33991 AC007952.6-201ENST00000573168 2673 ntBASIC25.3■■□□□ 1.64
MCM4P33991 AC003957.1-201ENST00000625108 2673 ntBASIC25.3■■□□□ 1.64
MCM4P33991 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
MCM4P33991 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MCM4P33991 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.3■■□□□ 1.64
MCM4P33991 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.3■■□□□ 1.64
MCM4P33991 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.3■■□□□ 1.64
MCM4P33991 AC137630.3-201ENST00000607245 391 ntBASIC25.3■■□□□ 1.64
MCM4P33991 MIR4787-201ENST00000607364 84 ntBASIC25.3■■□□□ 1.64
MCM4P33991 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.3■■□□□ 1.64
MCM4P33991 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
MCM4P33991 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MCM4P33991 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MCM4P33991 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MCM4P33991 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MCM4P33991 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.29■■□□□ 1.64
MCM4P33991 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.29■■□□□ 1.64
MCM4P33991 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
MCM4P33991 CA15P2-201ENST00000611168 834 ntBASIC25.29■■□□□ 1.64
MCM4P33991 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.29■■□□□ 1.64
MCM4P33991 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
MCM4P33991 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
MCM4P33991 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MCM4P33991 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MCM4P33991 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MCM4P33991 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
MCM4P33991 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC25.28■■□□□ 1.64
MCM4P33991 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MCM4P33991 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.28■■□□□ 1.64
MCM4P33991 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MCM4P33991 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
MCM4P33991 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MCM4P33991 LINC01529-204ENST00000636474 1715 ntBASIC25.28■■□□□ 1.64
MCM4P33991 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MCM4P33991 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
MCM4P33991 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
MCM4P33991 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
MCM4P33991 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC25.27■■□□□ 1.64
MCM4P33991 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
MCM4P33991 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
MCM4P33991 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.27■■□□□ 1.64
MCM4P33991 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.27■■□□□ 1.64
MCM4P33991 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
MCM4P33991 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.27■■□□□ 1.64
MCM4P33991 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
MCM4P33991 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
MCM4P33991 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
MCM4P33991 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
MCM4P33991 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
MCM4P33991 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
MCM4P33991 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
MCM4P33991 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
MCM4P33991 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
MCM4P33991 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
MCM4P33991 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MCM4P33991 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MCM4P33991 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MCM4P33991 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
MCM4P33991 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
MCM4P33991 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MCM4P33991 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MCM4P33991 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.26■■□□□ 1.63
MCM4P33991 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
MCM4P33991 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.26■■□□□ 1.63
MCM4P33991 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MCM4P33991 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.26■■□□□ 1.63
MCM4P33991 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.25■■□□□ 1.63
MCM4P33991 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC25.25■■□□□ 1.63
MCM4P33991 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
MCM4P33991 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
MCM4P33991 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
MCM4P33991 AL356441.2-201ENST00000443009 864 ntBASIC25.25■■□□□ 1.63
MCM4P33991 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.25■■□□□ 1.63
MCM4P33991 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.25■■□□□ 1.63
MCM4P33991 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
MCM4P33991 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.25■■□□□ 1.63
MCM4P33991 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
MCM4P33991 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
MCM4P33991 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
MCM4P33991 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
MCM4P33991 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms