Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTPS1P17812 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTPS1P17812 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CTPS1P17812 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CTPS1P17812 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.66■■□□□ 1.06
CTPS1P17812 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTPS1P17812 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTPS1P17812 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTPS1P17812 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTPS1P17812 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTPS1P17812 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.66■■□□□ 1.06
CTPS1P17812 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTPS1P17812 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTPS1P17812 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTPS1P17812 BX005040.4-201ENST00000637145 1518 ntBASIC21.65■■□□□ 1.06
CTPS1P17812 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.65■■□□□ 1.06
CTPS1P17812 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTPS1P17812 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.65■■□□□ 1.06
CTPS1P17812 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.65■■□□□ 1.06
CTPS1P17812 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CTPS1P17812 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTPS1P17812 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CTPS1P17812 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTPS1P17812 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.65■■□□□ 1.06
CTPS1P17812 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.65■■□□□ 1.06
CTPS1P17812 AC027612.3-201ENST00000413684 1047 ntBASIC21.65■■□□□ 1.06
CTPS1P17812 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.65■■□□□ 1.06
CTPS1P17812 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTPS1P17812 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.65■■□□□ 1.06
CTPS1P17812 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CTPS1P17812 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CTPS1P17812 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTPS1P17812 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTPS1P17812 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CTPS1P17812 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTPS1P17812 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.64■■□□□ 1.06
CTPS1P17812 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.64■■□□□ 1.05
CTPS1P17812 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
CTPS1P17812 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTPS1P17812 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CTPS1P17812 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CTPS1P17812 AL117328.2-201ENST00000624617 1940 ntBASIC21.64■■□□□ 1.05
CTPS1P17812 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTPS1P17812 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTPS1P17812 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTPS1P17812 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTPS1P17812 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.63■■□□□ 1.05
CTPS1P17812 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTPS1P17812 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTPS1P17812 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTPS1P17812 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTPS1P17812 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CTPS1P17812 RARRES2P6-201ENST00000567333 442 ntBASIC21.63■■□□□ 1.05
CTPS1P17812 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTPS1P17812 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.63■■□□□ 1.05
CTPS1P17812 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTPS1P17812 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.63■■□□□ 1.05
CTPS1P17812 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.63■■□□□ 1.05
CTPS1P17812 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.63■■□□□ 1.05
CTPS1P17812 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CTPS1P17812 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTPS1P17812 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.62■■□□□ 1.05
CTPS1P17812 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTPS1P17812 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTPS1P17812 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTPS1P17812 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CTPS1P17812 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTPS1P17812 YBX1P1-201ENST00000445822 960 ntBASIC21.62■■□□□ 1.05
CTPS1P17812 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.62■■□□□ 1.05
CTPS1P17812 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTPS1P17812 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTPS1P17812 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTPS1P17812 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CTPS1P17812 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTPS1P17812 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.61■■□□□ 1.05
CTPS1P17812 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTPS1P17812 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTPS1P17812 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.61■■□□□ 1.05
CTPS1P17812 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.61■■□□□ 1.05
CTPS1P17812 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTPS1P17812 AC026271.2-201ENST00000428091 497 ntBASIC21.61■■□□□ 1.05
CTPS1P17812 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.61■■□□□ 1.05
CTPS1P17812 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.61■■□□□ 1.05
CTPS1P17812 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CTPS1P17812 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTPS1P17812 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTPS1P17812 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTPS1P17812 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTPS1P17812 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.61■■□□□ 1.05
CTPS1P17812 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.61■■□□□ 1.05
CTPS1P17812 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTPS1P17812 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTPS1P17812 EP400NL-214ENST00000641289 2402 ntBASIC21.6■■□□□ 1.05
CTPS1P17812 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTPS1P17812 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTPS1P17812 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTPS1P17812 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTPS1P17812 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTPS1P17812 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTPS1P17812 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms