Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 AL162393.1-201ENST00000437852 946 ntBASIC19.73■□□□□ 0.75
SMIM18P0DKX4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM18P0DKX4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SMIM18P0DKX4 AC018445.3-201ENST00000624177 1945 ntBASIC19.72■□□□□ 0.75
SMIM18P0DKX4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM18P0DKX4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM18P0DKX4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM18P0DKX4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
SMIM18P0DKX4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM18P0DKX4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM18P0DKX4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM18P0DKX4 SMG8-203ENST00000578922 2178 ntBASIC19.72■□□□□ 0.75
SMIM18P0DKX4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.72■□□□□ 0.75
SMIM18P0DKX4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM18P0DKX4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM18P0DKX4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
SMIM18P0DKX4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM18P0DKX4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM18P0DKX4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.71■□□□□ 0.75
SMIM18P0DKX4 OXCT2P1-201ENST00000447263 1535 ntBASIC19.71■□□□□ 0.75
SMIM18P0DKX4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM18P0DKX4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SMIM18P0DKX4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.7■□□□□ 0.74
SMIM18P0DKX4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM18P0DKX4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM18P0DKX4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM18P0DKX4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM18P0DKX4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM18P0DKX4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.7■□□□□ 0.74
SMIM18P0DKX4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SMIM18P0DKX4 AC098818.2-201ENST00000564925 2320 ntBASIC19.7■□□□□ 0.74
SMIM18P0DKX4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.7■□□□□ 0.74
SMIM18P0DKX4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM18P0DKX4 BX323043.1-201ENST00000641006 1765 ntBASIC19.7■□□□□ 0.74
SMIM18P0DKX4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM18P0DKX4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
SMIM18P0DKX4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.69■□□□□ 0.74
SMIM18P0DKX4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM18P0DKX4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM18P0DKX4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM18P0DKX4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM18P0DKX4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM18P0DKX4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM18P0DKX4 AC060814.1-201ENST00000554326 538 ntBASIC19.69■□□□□ 0.74
SMIM18P0DKX4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM18P0DKX4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM18P0DKX4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM18P0DKX4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM18P0DKX4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM18P0DKX4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM18P0DKX4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.68■□□□□ 0.74
SMIM18P0DKX4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SMIM18P0DKX4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.68■□□□□ 0.74
SMIM18P0DKX4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM18P0DKX4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM18P0DKX4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM18P0DKX4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.68■□□□□ 0.74
SMIM18P0DKX4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM18P0DKX4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.68■□□□□ 0.74
SMIM18P0DKX4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.68■□□□□ 0.74
SMIM18P0DKX4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM18P0DKX4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms