Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSF1P09603 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSF1P09603 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.55■□□□□ 0.56
CSF1P09603 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.55■□□□□ 0.56
CSF1P09603 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSF1P09603 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSF1P09603 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSF1P09603 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSF1P09603 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSF1P09603 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.54■□□□□ 0.56
CSF1P09603 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.54■□□□□ 0.56
CSF1P09603 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.54■□□□□ 0.56
CSF1P09603 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.54■□□□□ 0.56
CSF1P09603 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSF1P09603 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSF1P09603 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.54■□□□□ 0.56
CSF1P09603 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CSF1P09603 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSF1P09603 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSF1P09603 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSF1P09603 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSF1P09603 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.53■□□□□ 0.56
CSF1P09603 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.53■□□□□ 0.56
CSF1P09603 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSF1P09603 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSF1P09603 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSF1P09603 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSF1P09603 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.53■□□□□ 0.56
CSF1P09603 AC137630.3-201ENST00000607245 391 ntBASIC18.53■□□□□ 0.56
CSF1P09603 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.53■□□□□ 0.56
CSF1P09603 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSF1P09603 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSF1P09603 Z98882.1-201ENST00000622160 2253 ntBASIC18.53■□□□□ 0.56
CSF1P09603 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.53■□□□□ 0.56
CSF1P09603 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSF1P09603 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.53■□□□□ 0.56
CSF1P09603 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.53■□□□□ 0.56
CSF1P09603 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSF1P09603 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSF1P09603 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSF1P09603 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSF1P09603 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.52■□□□□ 0.56
CSF1P09603 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSF1P09603 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.52■□□□□ 0.56
CSF1P09603 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.52■□□□□ 0.56
CSF1P09603 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.52■□□□□ 0.56
CSF1P09603 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.52■□□□□ 0.56
CSF1P09603 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.52■□□□□ 0.56
CSF1P09603 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSF1P09603 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.52■□□□□ 0.56
CSF1P09603 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSF1P09603 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSF1P09603 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.52■□□□□ 0.56
CSF1P09603 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSF1P09603 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSF1P09603 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSF1P09603 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSF1P09603 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.51■□□□□ 0.55
CSF1P09603 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CSF1P09603 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSF1P09603 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSF1P09603 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSF1P09603 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.51■□□□□ 0.55
CSF1P09603 AC004448.1-201ENST00000458332 883 ntBASIC18.51■□□□□ 0.55
CSF1P09603 AC120024.1-201ENST00000562672 995 ntBASIC18.51■□□□□ 0.55
CSF1P09603 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.51■□□□□ 0.55
CSF1P09603 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSF1P09603 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.51■□□□□ 0.55
CSF1P09603 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CSF1P09603 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSF1P09603 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSF1P09603 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CSF1P09603 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CSF1P09603 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CSF1P09603 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSF1P09603 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSF1P09603 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.5■□□□□ 0.55
CSF1P09603 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CSF1P09603 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSF1P09603 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.5■□□□□ 0.55
CSF1P09603 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CSF1P09603 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSF1P09603 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CSF1P09603 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.5■□□□□ 0.55
CSF1P09603 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.5■□□□□ 0.55
CSF1P09603 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CSF1P09603 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CSF1P09603 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSF1P09603 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CSF1P09603 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CSF1P09603 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSF1P09603 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CSF1P09603 AC021242.3-201ENST00000607598 1377 ntBASIC18.49■□□□□ 0.55
CSF1P09603 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CSF1P09603 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSF1P09603 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.49■□□□□ 0.55
CSF1P09603 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSF1P09603 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSF1P09603 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSF1P09603 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms