Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDRT1O95170 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDRT1O95170 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDRT1O95170 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT1O95170 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT1O95170 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDRT1O95170 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.14■□□□□ 0.65
CDRT1O95170 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT1O95170 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.65
CDRT1O95170 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.14■□□□□ 0.65
CDRT1O95170 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT1O95170 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.14■□□□□ 0.65
CDRT1O95170 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT1O95170 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT1O95170 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT1O95170 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT1O95170 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.13■□□□□ 0.65
CDRT1O95170 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.13■□□□□ 0.65
CDRT1O95170 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.13■□□□□ 0.65
CDRT1O95170 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.13■□□□□ 0.65
CDRT1O95170 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.13■□□□□ 0.65
CDRT1O95170 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.13■□□□□ 0.65
CDRT1O95170 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT1O95170 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT1O95170 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT1O95170 LINC01006-201ENST00000333319 2292 ntBASIC19.12■□□□□ 0.65
CDRT1O95170 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDRT1O95170 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT1O95170 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT1O95170 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT1O95170 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CDRT1O95170 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT1O95170 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT1O95170 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT1O95170 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.12■□□□□ 0.65
CDRT1O95170 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT1O95170 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT1O95170 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CDRT1O95170 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDRT1O95170 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDRT1O95170 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDRT1O95170 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDRT1O95170 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.11■□□□□ 0.65
CDRT1O95170 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.11■□□□□ 0.65
CDRT1O95170 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDRT1O95170 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.11■□□□□ 0.65
CDRT1O95170 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDRT1O95170 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDRT1O95170 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CDRT1O95170 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDRT1O95170 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDRT1O95170 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDRT1O95170 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CDRT1O95170 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDRT1O95170 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDRT1O95170 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDRT1O95170 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CDRT1O95170 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.1■□□□□ 0.65
CDRT1O95170 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDRT1O95170 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CDRT1O95170 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CDRT1O95170 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.1■□□□□ 0.65
CDRT1O95170 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.1■□□□□ 0.65
CDRT1O95170 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.1■□□□□ 0.65
CDRT1O95170 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDRT1O95170 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.1■□□□□ 0.65
CDRT1O95170 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDRT1O95170 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDRT1O95170 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDRT1O95170 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDRT1O95170 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDRT1O95170 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDRT1O95170 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDRT1O95170 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDRT1O95170 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDRT1O95170 AL033527.3-201ENST00000566366 1196 ntBASIC19.09■□□□□ 0.65
CDRT1O95170 MIR4508-201ENST00000584178 70 ntBASIC19.09■□□□□ 0.65
CDRT1O95170 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.09■□□□□ 0.65
CDRT1O95170 AC012354.3-201ENST00000623734 483 ntBASIC19.09■□□□□ 0.65
CDRT1O95170 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDRT1O95170 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDRT1O95170 KRT8P33-201ENST00000508125 1423 ntBASIC19.08■□□□□ 0.65
CDRT1O95170 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDRT1O95170 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDRT1O95170 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms