Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTP4A3O75365 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTP4A3O75365 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PTP4A3O75365 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.43■□□□□ 0.7
PTP4A3O75365 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTP4A3O75365 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A3O75365 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A3O75365 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PTP4A3O75365 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PTP4A3O75365 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.42■□□□□ 0.7
PTP4A3O75365 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A3O75365 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A3O75365 AC010525.1-201ENST00000585559 441 ntBASIC19.42■□□□□ 0.7
PTP4A3O75365 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.42■□□□□ 0.7
PTP4A3O75365 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PTP4A3O75365 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A3O75365 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PTP4A3O75365 Z98882.1-201ENST00000622160 2253 ntBASIC19.42■□□□□ 0.7
PTP4A3O75365 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.42■□□□□ 0.7
PTP4A3O75365 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A3O75365 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A3O75365 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTP4A3O75365 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PTP4A3O75365 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.42■□□□□ 0.7
PTP4A3O75365 AC005229.4-201ENST00000610085 2198 ntBASIC19.42■□□□□ 0.7
PTP4A3O75365 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
PTP4A3O75365 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTP4A3O75365 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
PTP4A3O75365 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTP4A3O75365 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.41■□□□□ 0.7
PTP4A3O75365 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTP4A3O75365 AC010141.3-201ENST00000456659 717 ntBASIC19.41■□□□□ 0.7
PTP4A3O75365 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PTP4A3O75365 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTP4A3O75365 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.41■□□□□ 0.7
PTP4A3O75365 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.41■□□□□ 0.7
PTP4A3O75365 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PTP4A3O75365 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTP4A3O75365 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTP4A3O75365 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.41■□□□□ 0.7
PTP4A3O75365 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A3O75365 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A3O75365 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PTP4A3O75365 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A3O75365 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.4■□□□□ 0.7
PTP4A3O75365 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.4■□□□□ 0.7
PTP4A3O75365 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PTP4A3O75365 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A3O75365 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A3O75365 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A3O75365 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.39■□□□□ 0.7
PTP4A3O75365 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
PTP4A3O75365 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTP4A3O75365 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.39■□□□□ 0.69
PTP4A3O75365 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.39■□□□□ 0.69
PTP4A3O75365 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.39■□□□□ 0.69
PTP4A3O75365 AC087239.1-201ENST00000622671 572 ntBASIC19.39■□□□□ 0.69
PTP4A3O75365 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PTP4A3O75365 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
PTP4A3O75365 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTP4A3O75365 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTP4A3O75365 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTP4A3O75365 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTP4A3O75365 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTP4A3O75365 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTP4A3O75365 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.38■□□□□ 0.69
PTP4A3O75365 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.38■□□□□ 0.69
PTP4A3O75365 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTP4A3O75365 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTP4A3O75365 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTP4A3O75365 OXCT2P1-201ENST00000447263 1535 ntBASIC19.38■□□□□ 0.69
PTP4A3O75365 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.38■□□□□ 0.69
PTP4A3O75365 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTP4A3O75365 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.38■□□□□ 0.69
PTP4A3O75365 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PTP4A3O75365 AL138724.1-201ENST00000606771 1088 ntBASIC19.38■□□□□ 0.69
PTP4A3O75365 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A3O75365 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A3O75365 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.37■□□□□ 0.69
PTP4A3O75365 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A3O75365 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A3O75365 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A3O75365 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.37■□□□□ 0.69
PTP4A3O75365 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A3O75365 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A3O75365 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.37■□□□□ 0.69
PTP4A3O75365 SERBP1P1-201ENST00000396021 1160 ntBASIC19.37■□□□□ 0.69
PTP4A3O75365 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.37■□□□□ 0.69
PTP4A3O75365 AL356441.2-201ENST00000443009 864 ntBASIC19.37■□□□□ 0.69
PTP4A3O75365 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.37■□□□□ 0.69
PTP4A3O75365 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
PTP4A3O75365 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A3O75365 MIR4466-201ENST00000606121 54 ntBASIC19.37■□□□□ 0.69
PTP4A3O75365 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A3O75365 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A3O75365 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.36■□□□□ 0.69
PTP4A3O75365 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A3O75365 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A3O75365 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A3O75365 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms