Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.89■■□□□ 1.09
RIPK2O43353 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.89■■□□□ 1.09
RIPK2O43353 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RIPK2O43353 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RIPK2O43353 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RIPK2O43353 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK2O43353 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.88■■□□□ 1.09
RIPK2O43353 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RIPK2O43353 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
RIPK2O43353 YBX1P4-201ENST00000392794 808 ntBASIC21.88■■□□□ 1.09
RIPK2O43353 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK2O43353 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RIPK2O43353 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK2O43353 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.88■■□□□ 1.09
RIPK2O43353 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RIPK2O43353 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
RIPK2O43353 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RIPK2O43353 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK2O43353 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
RIPK2O43353 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK2O43353 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.87■■□□□ 1.09
RIPK2O43353 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK2O43353 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK2O43353 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RIPK2O43353 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK2O43353 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK2O43353 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK2O43353 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RIPK2O43353 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK2O43353 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.86■■□□□ 1.09
RIPK2O43353 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK2O43353 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK2O43353 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.86■■□□□ 1.09
RIPK2O43353 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RIPK2O43353 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.86■■□□□ 1.09
RIPK2O43353 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.86■■□□□ 1.09
RIPK2O43353 AL499627.2-201ENST00000606283 725 ntBASIC21.86■■□□□ 1.09
RIPK2O43353 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.86■■□□□ 1.09
RIPK2O43353 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.86■■□□□ 1.09
RIPK2O43353 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.86■■□□□ 1.09
RIPK2O43353 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK2O43353 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RIPK2O43353 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.85■■□□□ 1.09
RIPK2O43353 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK2O43353 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK2O43353 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK2O43353 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK2O43353 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK2O43353 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.85■■□□□ 1.09
RIPK2O43353 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK2O43353 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.85■■□□□ 1.09
RIPK2O43353 AL031848.2-201ENST00000607670 837 ntBASIC21.85■■□□□ 1.09
RIPK2O43353 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.85■■□□□ 1.09
RIPK2O43353 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.85■■□□□ 1.09
RIPK2O43353 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.85■■□□□ 1.09
RIPK2O43353 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK2O43353 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK2O43353 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK2O43353 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.85■■□□□ 1.09
RIPK2O43353 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RIPK2O43353 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
RIPK2O43353 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RIPK2O43353 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK2O43353 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.84■■□□□ 1.09
RIPK2O43353 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK2O43353 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK2O43353 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK2O43353 AC079089.2-201ENST00000531211 1277 ntBASIC21.84■■□□□ 1.09
RIPK2O43353 AC104564.3-201ENST00000582367 638 ntBASIC21.84■■□□□ 1.09
RIPK2O43353 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RIPK2O43353 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK2O43353 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK2O43353 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.84■■□□□ 1.09
RIPK2O43353 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RIPK2O43353 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RIPK2O43353 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK2O43353 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK2O43353 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RIPK2O43353 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK2O43353 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK2O43353 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.83■■□□□ 1.09
RIPK2O43353 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK2O43353 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK2O43353 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
RIPK2O43353 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK2O43353 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK2O43353 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
RIPK2O43353 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.83■■□□□ 1.09
RIPK2O43353 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.83■■□□□ 1.09
RIPK2O43353 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.83■■□□□ 1.09
RIPK2O43353 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.83■■□□□ 1.09
RIPK2O43353 AL031602.1-201ENST00000633169 911 ntBASIC21.83■■□□□ 1.09
RIPK2O43353 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
RIPK2O43353 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.83■■□□□ 1.09
RIPK2O43353 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RIPK2O43353 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RIPK2O43353 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
RIPK2O43353 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RIPK2O43353 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RIPK2O43353 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms