Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AL136162.1-201ENST00000607711 1078 ntBASIC21.15■□□□□ 0.98
CDC7O00311 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDC7O00311 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CDC7O00311 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDC7O00311 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDC7O00311 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC7O00311 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDC7O00311 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
CDC7O00311 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.14■□□□□ 0.98
CDC7O00311 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CDC7O00311 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDC7O00311 AC008406.3-201ENST00000620001 1374 ntBASIC21.14■□□□□ 0.98
CDC7O00311 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC7O00311 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC7O00311 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CDC7O00311 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.14■□□□□ 0.97
CDC7O00311 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.14■□□□□ 0.97
CDC7O00311 AP005435.1-201ENST00000529293 1178 ntBASIC21.14■□□□□ 0.97
CDC7O00311 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.14■□□□□ 0.97
CDC7O00311 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.14■□□□□ 0.97
CDC7O00311 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
CDC7O00311 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC7O00311 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CDC7O00311 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDC7O00311 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.14■□□□□ 0.97
CDC7O00311 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDC7O00311 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC7O00311 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC7O00311 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CDC7O00311 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC7O00311 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.13■□□□□ 0.97
CDC7O00311 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDC7O00311 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDC7O00311 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.13■□□□□ 0.97
CDC7O00311 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.13■□□□□ 0.97
CDC7O00311 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.13■□□□□ 0.97
CDC7O00311 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC7O00311 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDC7O00311 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC7O00311 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC7O00311 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC7O00311 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC7O00311 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC7O00311 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDC7O00311 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.12■□□□□ 0.97
CDC7O00311 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC7O00311 AL137060.1-201ENST00000618151 2648 ntBASIC21.12■□□□□ 0.97
CDC7O00311 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.12■□□□□ 0.97
CDC7O00311 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC7O00311 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDC7O00311 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CDC7O00311 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC7O00311 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC7O00311 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.12■□□□□ 0.97
CDC7O00311 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC7O00311 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC7O00311 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC7O00311 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC7O00311 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.11■□□□□ 0.97
CDC7O00311 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CDC7O00311 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CDC7O00311 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CDC7O00311 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.11■□□□□ 0.97
CDC7O00311 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDC7O00311 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.11■□□□□ 0.97
CDC7O00311 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDC7O00311 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDC7O00311 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC7O00311 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.11■□□□□ 0.97
CDC7O00311 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC7O00311 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC7O00311 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC7O00311 AC135279.3-201ENST00000610945 1311 ntBASIC21.1■□□□□ 0.97
CDC7O00311 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.1■□□□□ 0.97
CDC7O00311 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC7O00311 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC7O00311 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC7O00311 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.1■□□□□ 0.97
CDC7O00311 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.1■□□□□ 0.97
CDC7O00311 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC7O00311 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC7O00311 AC026310.3-201ENST00000625186 2373 ntBASIC21.1■□□□□ 0.97
CDC7O00311 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC7O00311 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC7O00311 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC7O00311 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC7O00311 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
CDC7O00311 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC7O00311 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC7O00311 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC7O00311 BX842568.3-201ENST00000418104 571 ntBASIC21.09■□□□□ 0.97
CDC7O00311 AC096631.2-201ENST00000436136 790 ntBASIC21.09■□□□□ 0.97
CDC7O00311 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.09■□□□□ 0.97
CDC7O00311 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC7O00311 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CDC7O00311 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.09■□□□□ 0.97
CDC7O00311 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC7O00311 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC7O00311 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CDC7O00311 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms