Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH3D21A4FU49 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.92■□□□□ 0.78
SH3D21A4FU49 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SH3D21A4FU49 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3D21A4FU49 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.92■□□□□ 0.78
SH3D21A4FU49 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3D21A4FU49 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3D21A4FU49 AC144652.1-201ENST00000609974 1624 ntBASIC19.91■□□□□ 0.78
SH3D21A4FU49 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.91■□□□□ 0.78
SH3D21A4FU49 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.91■□□□□ 0.78
SH3D21A4FU49 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3D21A4FU49 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3D21A4FU49 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SH3D21A4FU49 AC105265.2-201ENST00000467189 838 ntBASIC19.91■□□□□ 0.78
SH3D21A4FU49 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.91■□□□□ 0.78
SH3D21A4FU49 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SH3D21A4FU49 AL136967.2-201ENST00000623968 743 ntBASIC19.91■□□□□ 0.78
SH3D21A4FU49 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SH3D21A4FU49 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3D21A4FU49 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.91■□□□□ 0.78
SH3D21A4FU49 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SH3D21A4FU49 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SH3D21A4FU49 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3D21A4FU49 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3D21A4FU49 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3D21A4FU49 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3D21A4FU49 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SH3D21A4FU49 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3D21A4FU49 MIR939-201ENST00000401314 82 ntBASIC19.9■□□□□ 0.78
SH3D21A4FU49 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.9■□□□□ 0.78
SH3D21A4FU49 AP001330.3-201ENST00000520123 633 ntBASIC19.9■□□□□ 0.78
SH3D21A4FU49 AC099791.2-201ENST00000605725 427 ntBASIC19.9■□□□□ 0.78
SH3D21A4FU49 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SH3D21A4FU49 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.9■□□□□ 0.78
SH3D21A4FU49 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3D21A4FU49 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3D21A4FU49 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
SH3D21A4FU49 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
SH3D21A4FU49 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SH3D21A4FU49 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SH3D21A4FU49 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SH3D21A4FU49 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SH3D21A4FU49 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SH3D21A4FU49 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SH3D21A4FU49 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SH3D21A4FU49 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SH3D21A4FU49 MIR4767-201ENST00000582827 78 ntBASIC19.89■□□□□ 0.77
SH3D21A4FU49 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.89■□□□□ 0.77
SH3D21A4FU49 AC009102.2-201ENST00000606772 1639 ntBASIC19.89■□□□□ 0.77
SH3D21A4FU49 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3D21A4FU49 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SH3D21A4FU49 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SH3D21A4FU49 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.88■□□□□ 0.77
SH3D21A4FU49 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3D21A4FU49 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SH3D21A4FU49 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SH3D21A4FU49 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SH3D21A4FU49 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.88■□□□□ 0.77
SH3D21A4FU49 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.88■□□□□ 0.77
SH3D21A4FU49 SERBP1P1-201ENST00000396021 1160 ntBASIC19.88■□□□□ 0.77
SH3D21A4FU49 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.88■□□□□ 0.77
SH3D21A4FU49 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3D21A4FU49 AC091305.1-201ENST00000479476 895 ntBASIC19.88■□□□□ 0.77
SH3D21A4FU49 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.88■□□□□ 0.77
SH3D21A4FU49 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.88■□□□□ 0.77
SH3D21A4FU49 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SH3D21A4FU49 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3D21A4FU49 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3D21A4FU49 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SH3D21A4FU49 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SH3D21A4FU49 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3D21A4FU49 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3D21A4FU49 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3D21A4FU49 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.87■□□□□ 0.77
SH3D21A4FU49 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SH3D21A4FU49 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.87■□□□□ 0.77
SH3D21A4FU49 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.87■□□□□ 0.77
SH3D21A4FU49 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SH3D21A4FU49 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3D21A4FU49 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
SH3D21A4FU49 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3D21A4FU49 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.86■□□□□ 0.77
SH3D21A4FU49 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.86■□□□□ 0.77
SH3D21A4FU49 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SH3D21A4FU49 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3D21A4FU49 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3D21A4FU49 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3D21A4FU49 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3D21A4FU49 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3D21A4FU49 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SH3D21A4FU49 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SH3D21A4FU49 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.86■□□□□ 0.77
SH3D21A4FU49 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3D21A4FU49 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SH3D21A4FU49 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SH3D21A4FU49 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SH3D21A4FU49 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.86■□□□□ 0.77
SH3D21A4FU49 AC244015.2-201ENST00000616358 1861 ntBASIC19.86■□□□□ 0.77
SH3D21A4FU49 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3D21A4FU49 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms