Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 COX20-201ENST00000366528 568 ntTSL 2 BASIC32.15■■■□□ 2.74
HFM1A2PYH4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC32.15■■■□□ 2.74
HFM1A2PYH4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC32.15■■■□□ 2.74
HFM1A2PYH4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC32.15■■■□□ 2.74
HFM1A2PYH4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC32.15■■■□□ 2.74
HFM1A2PYH4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
HFM1A2PYH4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
HFM1A2PYH4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
HFM1A2PYH4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
HFM1A2PYH4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC32.14■■■□□ 2.74
HFM1A2PYH4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
HFM1A2PYH4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
HFM1A2PYH4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC32.13■■■□□ 2.73
HFM1A2PYH4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC32.13■■■□□ 2.73
HFM1A2PYH4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
HFM1A2PYH4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC32.13■■■□□ 2.73
HFM1A2PYH4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
HFM1A2PYH4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC32.13■■■□□ 2.73
HFM1A2PYH4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC32.13■■■□□ 2.73
HFM1A2PYH4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
HFM1A2PYH4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC32.13■■■□□ 2.73
HFM1A2PYH4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
HFM1A2PYH4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC32.13■■■□□ 2.73
HFM1A2PYH4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
HFM1A2PYH4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
HFM1A2PYH4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
HFM1A2PYH4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC32.12■■■□□ 2.73
HFM1A2PYH4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC32.12■■■□□ 2.73
HFM1A2PYH4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC32.12■■■□□ 2.73
HFM1A2PYH4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC32.12■■■□□ 2.73
HFM1A2PYH4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC32.12■■■□□ 2.73
HFM1A2PYH4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
HFM1A2PYH4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
HFM1A2PYH4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
HFM1A2PYH4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
HFM1A2PYH4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
HFM1A2PYH4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC32.11■■■□□ 2.73
HFM1A2PYH4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC32.11■■■□□ 2.73
HFM1A2PYH4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
HFM1A2PYH4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
HFM1A2PYH4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
HFM1A2PYH4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
HFM1A2PYH4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC32.1■■■□□ 2.73
HFM1A2PYH4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC32.1■■■□□ 2.73
HFM1A2PYH4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC32.1■■■□□ 2.73
HFM1A2PYH4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
HFM1A2PYH4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
HFM1A2PYH4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC32.1■■■□□ 2.73
HFM1A2PYH4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
HFM1A2PYH4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
HFM1A2PYH4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
HFM1A2PYH4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC32.09■■■□□ 2.73
HFM1A2PYH4 AC006015.1-201ENST00000429970 570 ntBASIC32.09■■■□□ 2.73
HFM1A2PYH4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC32.09■■■□□ 2.73
HFM1A2PYH4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
HFM1A2PYH4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC32.09■■■□□ 2.73
HFM1A2PYH4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC32.09■■■□□ 2.73
HFM1A2PYH4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC32.09■■■□□ 2.73
HFM1A2PYH4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC32.09■■■□□ 2.73
HFM1A2PYH4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
HFM1A2PYH4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC32.08■■■□□ 2.73
HFM1A2PYH4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
HFM1A2PYH4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC32.08■■■□□ 2.73
HFM1A2PYH4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
HFM1A2PYH4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
HFM1A2PYH4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
HFM1A2PYH4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC32.07■■■□□ 2.73
HFM1A2PYH4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC32.07■■■□□ 2.72
HFM1A2PYH4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC32.07■■■□□ 2.72
HFM1A2PYH4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC32.07■■■□□ 2.72
HFM1A2PYH4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
HFM1A2PYH4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC32.07■■■□□ 2.72
HFM1A2PYH4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC32.07■■■□□ 2.72
HFM1A2PYH4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
HFM1A2PYH4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
HFM1A2PYH4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC32.06■■■□□ 2.72
HFM1A2PYH4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
HFM1A2PYH4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC32.06■■■□□ 2.72
HFM1A2PYH4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
HFM1A2PYH4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
HFM1A2PYH4 RARRES2P11-201ENST00000635158 484 ntBASIC32.06■■■□□ 2.72
HFM1A2PYH4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
HFM1A2PYH4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
HFM1A2PYH4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
HFM1A2PYH4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC32.05■■■□□ 2.72
HFM1A2PYH4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
HFM1A2PYH4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
HFM1A2PYH4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
HFM1A2PYH4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
HFM1A2PYH4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
HFM1A2PYH4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
HFM1A2PYH4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
HFM1A2PYH4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
HFM1A2PYH4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC32.05■■■□□ 2.72
HFM1A2PYH4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC32.04■■■□□ 2.72
HFM1A2PYH4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC32.04■■■□□ 2.72
HFM1A2PYH4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
HFM1A2PYH4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC32.04■■■□□ 2.72
HFM1A2PYH4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC32.04■■■□□ 2.72
HFM1A2PYH4 AC090192.1-201ENST00000517740 490 ntBASIC32.04■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms