Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLRN2A0PK11 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
CLRN2A0PK11 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLRN2A0PK11 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLRN2A0PK11 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.73■■□□□ 1.71
CLRN2A0PK11 AC098934.4-201ENST00000564127 592 ntBASIC25.73■■□□□ 1.71
CLRN2A0PK11 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.73■■□□□ 1.71
CLRN2A0PK11 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLRN2A0PK11 AP004607.7-201ENST00000527152 1677 ntBASIC25.73■■□□□ 1.71
CLRN2A0PK11 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLRN2A0PK11 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLRN2A0PK11 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLRN2A0PK11 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLRN2A0PK11 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLRN2A0PK11 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CLRN2A0PK11 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLRN2A0PK11 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLRN2A0PK11 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.72■■□□□ 1.71
CLRN2A0PK11 AC010141.2-201ENST00000452426 721 ntBASIC25.72■■□□□ 1.71
CLRN2A0PK11 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CLRN2A0PK11 AC105036.2-201ENST00000569468 176 ntBASIC25.72■■□□□ 1.71
CLRN2A0PK11 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLRN2A0PK11 AC066615.1-201ENST00000640911 628 ntBASIC25.72■■□□□ 1.71
CLRN2A0PK11 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLRN2A0PK11 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CLRN2A0PK11 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLRN2A0PK11 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CLRN2A0PK11 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CLRN2A0PK11 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CLRN2A0PK11 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CLRN2A0PK11 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.71■■□□□ 1.71
CLRN2A0PK11 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
CLRN2A0PK11 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.71■■□□□ 1.71
CLRN2A0PK11 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CLRN2A0PK11 AF201337.1-201ENST00000520239 748 ntBASIC25.71■■□□□ 1.71
CLRN2A0PK11 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.71■■□□□ 1.71
CLRN2A0PK11 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.71■■□□□ 1.71
CLRN2A0PK11 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
CLRN2A0PK11 AC010536.3-201ENST00000620306 533 ntBASIC25.71■■□□□ 1.71
CLRN2A0PK11 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.71■■□□□ 1.71
CLRN2A0PK11 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CLRN2A0PK11 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.71■■□□□ 1.71
CLRN2A0PK11 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.71
CLRN2A0PK11 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.7■■□□□ 1.71
CLRN2A0PK11 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.7■■□□□ 1.7
CLRN2A0PK11 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.7■■□□□ 1.7
CLRN2A0PK11 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.7■■□□□ 1.7
CLRN2A0PK11 AC069152.1-201ENST00000438030 544 ntBASIC25.7■■□□□ 1.7
CLRN2A0PK11 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.7■■□□□ 1.7
CLRN2A0PK11 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
CLRN2A0PK11 AC092068.2-201ENST00000590491 1708 ntBASIC25.7■■□□□ 1.7
CLRN2A0PK11 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CLRN2A0PK11 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.7■■□□□ 1.7
CLRN2A0PK11 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLRN2A0PK11 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
CLRN2A0PK11 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLRN2A0PK11 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLRN2A0PK11 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLRN2A0PK11 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CLRN2A0PK11 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.69■■□□□ 1.7
CLRN2A0PK11 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.69■■□□□ 1.7
CLRN2A0PK11 AC138907.5-202ENST00000569484 235 ntBASIC25.69■■□□□ 1.7
CLRN2A0PK11 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CLRN2A0PK11 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.69■■□□□ 1.7
CLRN2A0PK11 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLRN2A0PK11 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLRN2A0PK11 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLRN2A0PK11 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC25.68■■□□□ 1.7
CLRN2A0PK11 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.68■■□□□ 1.7
CLRN2A0PK11 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLRN2A0PK11 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CLRN2A0PK11 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.67■■□□□ 1.7
CLRN2A0PK11 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLRN2A0PK11 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.67■■□□□ 1.7
CLRN2A0PK11 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.67■■□□□ 1.7
CLRN2A0PK11 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.67■■□□□ 1.7
CLRN2A0PK11 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.67■■□□□ 1.7
CLRN2A0PK11 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CLRN2A0PK11 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.67■■□□□ 1.7
CLRN2A0PK11 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.67■■□□□ 1.7
CLRN2A0PK11 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.66■■□□□ 1.7
CLRN2A0PK11 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.66■■□□□ 1.7
CLRN2A0PK11 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.66■■□□□ 1.7
CLRN2A0PK11 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLRN2A0PK11 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
CLRN2A0PK11 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLRN2A0PK11 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CLRN2A0PK11 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CLRN2A0PK11 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CLRN2A0PK11 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.65■■□□□ 1.7
CLRN2A0PK11 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CLRN2A0PK11 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC25.65■■□□□ 1.7
CLRN2A0PK11 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CLRN2A0PK11 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLRN2A0PK11 AC133552.2-202ENST00000575694 574 ntBASIC25.65■■□□□ 1.7
CLRN2A0PK11 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.65■■□□□ 1.7
CLRN2A0PK11 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CLRN2A0PK11 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLRN2A0PK11 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLRN2A0PK11 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms