Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AC087742.1-201ENST00000575880 1738 ntBASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AC104564.3-201ENST00000582367 638 ntBASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AC087623.3-201ENST00000607047 1098 ntBASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV4S1A1TA0A5B7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV4S1A1TA0A5B7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.27■□□□□ 0.36
TCRBV4S1A1TA0A5B7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV4S1A1TA0A5B7 IGHV3-19-201ENST00000521488 291 ntBASIC17.27■□□□□ 0.36
TCRBV4S1A1TA0A5B7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV4S1A1TA0A5B7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV4S1A1TA0A5B7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.27■□□□□ 0.35
TCRBV4S1A1TA0A5B7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV4S1A1TA0A5B7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.27■□□□□ 0.35
TCRBV4S1A1TA0A5B7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV4S1A1TA0A5B7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV4S1A1TA0A5B7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV4S1A1TA0A5B7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV4S1A1TA0A5B7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV4S1A1TA0A5B7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TCRBV4S1A1TA0A5B7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV4S1A1TA0A5B7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.26■□□□□ 0.35
TCRBV4S1A1TA0A5B7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV4S1A1TA0A5B7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV4S1A1TA0A5B7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV4S1A1TA0A5B7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV4S1A1TA0A5B7 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.26■□□□□ 0.35
TCRBV4S1A1TA0A5B7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV4S1A1TA0A5B7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV4S1A1TA0A5B7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
TCRBV4S1A1TA0A5B7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV4S1A1TA0A5B7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TCRBV4S1A1TA0A5B7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TCRBV4S1A1TA0A5B7 AC007375.3-201ENST00000600936 2314 ntBASIC17.25■□□□□ 0.35
TCRBV4S1A1TA0A5B7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV4S1A1TA0A5B7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV4S1A1TA0A5B7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TCRBV4S1A1TA0A5B7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV4S1A1TA0A5B7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV4S1A1TA0A5B7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.25■□□□□ 0.35
TCRBV4S1A1TA0A5B7 AC010525.1-201ENST00000585559 441 ntBASIC17.25■□□□□ 0.35
TCRBV4S1A1TA0A5B7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV4S1A1TA0A5B7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.25■□□□□ 0.35
TCRBV4S1A1TA0A5B7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TCRBV4S1A1TA0A5B7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV4S1A1TA0A5B7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV4S1A1TA0A5B7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV4S1A1TA0A5B7 OR2I1P-207ENST00000453522 948 ntBASIC17.24■□□□□ 0.35
TCRBV4S1A1TA0A5B7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.24■□□□□ 0.35
TCRBV4S1A1TA0A5B7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.24■□□□□ 0.35
TCRBV4S1A1TA0A5B7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.24■□□□□ 0.35
TCRBV4S1A1TA0A5B7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV4S1A1TA0A5B7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TCRBV4S1A1TA0A5B7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV4S1A1TA0A5B7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV4S1A1TA0A5B7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 AL358852.1-201ENST00000623174 1268 ntBASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TCRBV4S1A1TA0A5B7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms