Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV4A0A0B4J268 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV4A0A0B4J268 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV4A0A0B4J268 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV4A0A0B4J268 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV4A0A0B4J268 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 AC131281.2-201ENST00000520478 145 ntBASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV4A0A0B4J268 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 SERBP1P1-201ENST00000396021 1160 ntBASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 AC079089.2-201ENST00000531211 1277 ntBASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 AC011298.3-201ENST00000615796 283 ntBASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRAV4A0A0B4J268 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV4A0A0B4J268 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV4A0A0B4J268 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV4A0A0B4J268 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
TRAV4A0A0B4J268 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV4A0A0B4J268 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.46■□□□□ 0.06
TRAV4A0A0B4J268 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV4A0A0B4J268 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 AC136469.2-201ENST00000623944 1028 ntBASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV4A0A0B4J268 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms