Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 SRD5A1P1-201ENST00000442297 786 ntBASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV8-2A0A0B4J237 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV8-2A0A0B4J237 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.33■□□□□ 0.21
TRAV8-2A0A0B4J237 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV8-2A0A0B4J237 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV8-2A0A0B4J237 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TRAV8-2A0A0B4J237 AC079089.2-201ENST00000531211 1277 ntBASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
TRAV8-2A0A0B4J237 AL137060.1-201ENST00000618151 2648 ntBASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 AL356441.2-201ENST00000443009 864 ntBASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV8-2A0A0B4J237 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 OR2I1P-207ENST00000453522 948 ntBASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-2A0A0B4J237 AC026310.3-201ENST00000625186 2373 ntBASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-2A0A0B4J237 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms