Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 AC093536.1-201ENST00000569153 554 ntBASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV9-1A0A075B6T8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 AP005212.1-201ENST00000581547 1997 ntBASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV9-1A0A075B6T8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV9-1A0A075B6T8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 CA15P2-201ENST00000611168 834 ntBASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV9-1A0A075B6T8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
TRAV9-1A0A075B6T8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.14■□□□□ 0.18
TRAV9-1A0A075B6T8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRAV9-1A0A075B6T8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms