Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV20-1A0A075B6N2 Z98882.1-201ENST00000622160 2253 ntBASIC14.41□□□□□ -0.1
TRBV20-1A0A075B6N2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV20-1A0A075B6N2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRBV20-1A0A075B6N2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.41□□□□□ -0.1
TRBV20-1A0A075B6N2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
TRBV20-1A0A075B6N2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
TRBV20-1A0A075B6N2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV20-1A0A075B6N2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV20-1A0A075B6N2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.41□□□□□ -0.1
TRBV20-1A0A075B6N2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV20-1A0A075B6N2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV20-1A0A075B6N2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC14.41□□□□□ -0.1
TRBV20-1A0A075B6N2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRBV20-1A0A075B6N2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV20-1A0A075B6N2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 ALDH1A3-203ENST00000557963 1670 ntBASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 SMG8-203ENST00000578922 2178 ntBASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV20-1A0A075B6N2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV20-1A0A075B6N2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TRBV20-1A0A075B6N2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV20-1A0A075B6N2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRBV20-1A0A075B6N2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV20-1A0A075B6N2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV20-1A0A075B6N2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV20-1A0A075B6N2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV20-1A0A075B6N2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV20-1A0A075B6N2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC14.37□□□□□ -0.11
TRBV20-1A0A075B6N2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms