Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SLC1A1P43005 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC12.62□□□□□ -0.39
SLC1A1P43005 ZNF581-201ENST00000270451 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 UFC1-201ENST00000368003 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SLC1A1P43005 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 SNORA57-201ENST00000383870 149 ntBASIC12.62□□□□□ -0.39
SLC1A1P43005 DMKN-202ENST00000392206 458 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SLC1A1P43005 AC106875.1-202ENST00000435175 1170 ntTSL 3 BASIC12.62□□□□□ -0.39
SLC1A1P43005 MRPS11P1-201ENST00000437558 522 ntBASIC12.62□□□□□ -0.39
SLC1A1P43005 CD79A-202ENST00000444740 567 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 AC114495.2-201ENST00000452686 437 ntBASIC12.62□□□□□ -0.39
SLC1A1P43005 UTP23-203ENST00000517820 796 ntTSL 3 BASIC12.62□□□□□ -0.39
SLC1A1P43005 ZNHIT1P1-201ENST00000523947 444 ntBASIC12.62□□□□□ -0.39
SLC1A1P43005 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 RN7SL811P-201ENST00000580735 298 ntBASIC12.62□□□□□ -0.39
SLC1A1P43005 ZNF581-204ENST00000588537 1100 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
SLC1A1P43005 Metazoa_SRP.59-201ENST00000621376 277 ntBASIC12.62□□□□□ -0.39
SLC1A1P43005 COG6-212ENST00000630730 186 ntTSL 5 BASIC12.62□□□□□ -0.39
SLC1A1P43005 ZNF627-201ENST00000361113 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 NRAV-201ENST00000500741 1901 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 ACKR1-204ENST00000537147 1902 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SLC1A1P43005 CHMP1B-201ENST00000526991 3054 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SLC1A1P43005 WWP2-201ENST00000356003 4227 ntTSL 2 BASIC12.62□□□□□ -0.39
SLC1A1P43005 FDXACB1-201ENST00000260257 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC12.62□□□□□ -0.39
SLC1A1P43005 MFSD6-202ENST00000392328 4797 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SLC1A1P43005 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC12.62□□□□□ -0.39
SLC1A1P43005 CHTF8P1-201ENST00000414660 1541 ntBASIC12.62□□□□□ -0.39
SLC1A1P43005 PCNX4-204ENST00000406949 3513 ntTSL 2 BASIC12.62□□□□□ -0.39
SLC1A1P43005 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SLC1A1P43005 TCF7-203ENST00000395023 2815 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 AC012313.8-201ENST00000595059 5402 ntBASIC12.61□□□□□ -0.39
SLC1A1P43005 LINC00689-201ENST00000413238 4684 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 FCRLA-206ENST00000367949 1792 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 CLP1-203ENST00000529430 1778 ntTSL 5 BASIC12.61□□□□□ -0.39
SLC1A1P43005 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC12.61□□□□□ -0.39
SLC1A1P43005 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 IL1RL2-203ENST00000441515 1484 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 TCF12-204ENST00000438423 4786 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
SLC1A1P43005 AL137786.1-201ENST00000553378 3030 ntBASIC12.61□□□□□ -0.39
SLC1A1P43005 VDAC1-202ENST00000395044 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SLC1A1P43005 HLA-U-204ENST00000418981 186 ntBASIC12.61□□□□□ -0.39
SLC1A1P43005 SGCZ-202ENST00000421524 867 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC12.61□□□□□ -0.39
SLC1A1P43005 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC12.61□□□□□ -0.39
SLC1A1P43005 SERBP1P4-201ENST00000446711 1162 ntBASIC12.61□□□□□ -0.39
SLC1A1P43005 LINC02051-201ENST00000456535 690 ntTSL 3 BASIC12.61□□□□□ -0.39
SLC1A1P43005 HNRNPA3P13-201ENST00000512222 1122 ntBASIC12.61□□□□□ -0.39
SLC1A1P43005 CETN3-205ENST00000522842 664 ntTSL 2 BASIC12.61□□□□□ -0.39
SLC1A1P43005 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SLC1A1P43005 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC12.61□□□□□ -0.39
SLC1A1P43005 ZEB1-AS1-207ENST00000606286 476 ntTSL 4 BASIC12.61□□□□□ -0.39
SLC1A1P43005 AC138627.1-201ENST00000641127 1257 ntBASIC12.61□□□□□ -0.39
SLC1A1P43005 PTOV1-AS1-202ENST00000600742 3181 ntTSL 2 BASIC12.61□□□□□ -0.39
SLC1A1P43005 TRIM40-205ENST00000307859 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 AC018861.1-201ENST00000518404 1614 ntBASIC12.61□□□□□ -0.39
SLC1A1P43005 CNBD2-204ENST00000489667 2531 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 NOBOX-202ENST00000483238 1980 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SLC1A1P43005 EXOSC9-202ENST00000379663 1529 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC12.61□□□□□ -0.39
SLC1A1P43005 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 TPM3-223ENST00000611659 3149 ntTSL 3 BASIC12.61□□□□□ -0.39
SLC1A1P43005 ARHGEF9-213ENST00000624210 1888 ntTSL 2 BASIC12.61□□□□□ -0.39
SLC1A1P43005 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 GHRL-202ENST00000335542 1425 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 SPRYD3-201ENST00000301463 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 STAT6-220ENST00000556155 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SLC1A1P43005 SEPT10-203ENST00000397714 2719 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SLC1A1P43005 AC107892.1-201ENST00000577382 2727 ntTSL 2 BASIC12.61□□□□□ -0.39
SLC1A1P43005 G3BP2-201ENST00000357854 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 SLC25A19-204ENST00000416858 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 ARHGAP27-212ENST00000532038 3694 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SLC1A1P43005 TP53-218ENST00000610292 2639 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 AC026469.1-201ENST00000621095 3306 ntBASIC12.6□□□□□ -0.39
SLC1A1P43005 ACVR1-207ENST00000434821 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 PCYT1A-206ENST00000431016 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 ARL4C-201ENST00000339728 3385 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 HYPK-203ENST00000458412 1712 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SLC1A1P43005 ANKLE2-208ENST00000542282 3302 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
SLC1A1P43005 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
SLC1A1P43005 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SLC1A1P43005 AC097533.1-201ENST00000413478 479 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms