Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NR2F1-AS1-213ENST00000607797 3380 ntTSL 2 BASIC12.71□□□□□ -0.37
SLC1A1P43005 AC005865.1-201ENST00000432994 3004 ntTSL 2 BASIC12.71□□□□□ -0.37
SLC1A1P43005 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
SLC1A1P43005 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SLC1A1P43005 TOM1L1-213ENST00000572405 2337 ntTSL 2 BASIC12.71□□□□□ -0.37
SLC1A1P43005 POPDC2-204ENST00000468801 1345 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SLC1A1P43005 MEF2C-207ENST00000503554 1345 ntTSL 5 BASIC12.71□□□□□ -0.37
SLC1A1P43005 AC012676.5-201ENST00000624337 1955 ntBASIC12.71□□□□□ -0.37
SLC1A1P43005 TRMT10B-201ENST00000297994 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SLC1A1P43005 CSRNP1-202ENST00000514182 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SLC1A1P43005 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SLC1A1P43005 CFAP43-204ENST00000369720 2876 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SLC1A1P43005 CPNE8-203ENST00000538596 2875 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SLC1A1P43005 IFNA6-201ENST00000259555 704 ntBASIC12.71□□□□□ -0.37
SLC1A1P43005 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SLC1A1P43005 GSTM2P1-201ENST00000405166 654 ntBASIC12.71□□□□□ -0.37
SLC1A1P43005 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC12.71□□□□□ -0.37
SLC1A1P43005 RPL13AP5-201ENST00000439189 612 ntBASIC12.71□□□□□ -0.37
SLC1A1P43005 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC12.71□□□□□ -0.37
SLC1A1P43005 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC12.71□□□□□ -0.37
SLC1A1P43005 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SLC1A1P43005 FAM86JP-202ENST00000484500 988 ntBASIC12.71□□□□□ -0.37
SLC1A1P43005 GPX3-202ENST00000517973 612 ntTSL 3 BASIC12.71□□□□□ -0.37
SLC1A1P43005 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC12.71□□□□□ -0.37
SLC1A1P43005 SLIRP-209ENST00000557342 408 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SLC1A1P43005 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC12.71□□□□□ -0.37
SLC1A1P43005 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC12.71□□□□□ -0.37
SLC1A1P43005 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC12.71□□□□□ -0.37
SLC1A1P43005 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC12.71□□□□□ -0.37
SLC1A1P43005 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SLC1A1P43005 AC090409.1-202ENST00000586949 653 ntTSL 2 BASIC12.71□□□□□ -0.37
SLC1A1P43005 IPO7-208ENST00000630083 195 ntTSL 5 BASIC12.71□□□□□ -0.37
SLC1A1P43005 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SLC1A1P43005 AL138921.3-201ENST00000636357 992 ntBASIC12.71□□□□□ -0.37
SLC1A1P43005 AC008536.3-201ENST00000623282 1599 ntBASIC12.71□□□□□ -0.37
SLC1A1P43005 MYL9-201ENST00000279022 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SLC1A1P43005 LACC1-201ENST00000325686 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SLC1A1P43005 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SLC1A1P43005 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SLC1A1P43005 MAB21L2-201ENST00000317605 2772 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
SLC1A1P43005 DBH-202ENST00000393056 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SLC1A1P43005 AL050303.4-201ENST00000624520 1839 ntBASIC12.71□□□□□ -0.38
SLC1A1P43005 ITGA4-203ENST00000397033 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SLC1A1P43005 ZNF730-202ENST00000597761 2374 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SLC1A1P43005 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC12.71□□□□□ -0.38
SLC1A1P43005 LRRC27-202ENST00000368612 1765 ntTSL 2 BASIC12.71□□□□□ -0.38
SLC1A1P43005 RIPOR1-202ENST00000379312 4116 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
SLC1A1P43005 CANT1-201ENST00000302345 3534 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SLC1A1P43005 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SLC1A1P43005 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SLC1A1P43005 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SLC1A1P43005 ZNF239-202ENST00000374446 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SLC1A1P43005 NXPE1-205ENST00000536312 2006 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SLC1A1P43005 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SLC1A1P43005 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SLC1A1P43005 GLB1L3-203ENST00000431683 2583 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SLC1A1P43005 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SLC1A1P43005 UBE2A-211ENST00000631185 1435 ntTSL 5 BASIC12.71□□□□□ -0.38
SLC1A1P43005 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SLC1A1P43005 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SLC1A1P43005 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 ROBO4-208ENST00000533054 3071 ntTSL 2 BASIC12.7□□□□□ -0.38
SLC1A1P43005 AC007906.2-202ENST00000619363 1687 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SLC1A1P43005 PLSCR1-201ENST00000342435 2233 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 SPIN2A-202ENST00000374908 2468 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SLC1A1P43005 ELMO2-204ENST00000396391 3574 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 EXD2-204ENST00000409242 2496 ntTSL 2 BASIC12.7□□□□□ -0.38
SLC1A1P43005 RASGRP4-208ENST00000587753 3011 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 AC092295.2-201ENST00000592087 1392 ntBASIC12.7□□□□□ -0.38
SLC1A1P43005 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 GBA-201ENST00000327247 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 VDR-208ENST00000550325 3925 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 AP002360.1-203ENST00000321844 5363 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 IL32-204ENST00000396887 789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 RPL21P135-201ENST00000442539 791 ntBASIC12.7□□□□□ -0.38
SLC1A1P43005 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC12.7□□□□□ -0.38
SLC1A1P43005 AC008494.1-201ENST00000497612 796 ntBASIC12.7□□□□□ -0.38
SLC1A1P43005 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 TRPC7-AS2-201ENST00000513958 706 ntTSL 5 BASIC12.7□□□□□ -0.38
SLC1A1P43005 IGHVII-65-1-201ENST00000519992 302 ntBASIC12.7□□□□□ -0.38
SLC1A1P43005 AP006437.2-201ENST00000528000 345 ntTSL 3 BASIC12.7□□□□□ -0.38
SLC1A1P43005 FTH1-205ENST00000529631 507 ntTSL 4 BASIC12.7□□□□□ -0.38
SLC1A1P43005 OR5BA1P-201ENST00000529722 982 ntBASIC12.7□□□□□ -0.38
SLC1A1P43005 AC022167.1-201ENST00000564919 409 ntTSL 3 BASIC12.7□□□□□ -0.38
SLC1A1P43005 AC007923.4-201ENST00000578650 568 ntTSL 4 BASIC12.7□□□□□ -0.38
SLC1A1P43005 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC12.7□□□□□ -0.38
SLC1A1P43005 AC245369.7-201ENST00000631386 350 ntBASIC12.7□□□□□ -0.38
SLC1A1P43005 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SLC1A1P43005 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 TPCN1-204ENST00000541517 5173 ntTSL 5 BASIC12.7□□□□□ -0.38
SLC1A1P43005 NLRC3-201ENST00000324659 3414 ntTSL 5 BASIC12.7□□□□□ -0.38
SLC1A1P43005 EXT2-201ENST00000343631 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 SEC61A1-201ENST00000243253 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 FMO1-208ENST00000617670 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SLC1A1P43005 CALU-201ENST00000249364 3357 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms