Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 AC010141.3-201ENST00000456659 717 ntBASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA9Q9Y5G4 AL117328.2-201ENST00000624617 1940 ntBASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 SMUG1P1-201ENST00000590640 811 ntBASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 AC104771.1-201ENST00000603335 964 ntBASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGA9Q9Y5G4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGA9Q9Y5G4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA9Q9Y5G4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHGA9Q9Y5G4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA9Q9Y5G4 AC006970.2-201ENST00000450065 779 ntBASIC20.18■□□□□ 0.82
PCDHGA9Q9Y5G4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDHGA9Q9Y5G4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHGA9Q9Y5G4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGA9Q9Y5G4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGA9Q9Y5G4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA9Q9Y5G4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA9Q9Y5G4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA9Q9Y5G4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA9Q9Y5G4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 AC004687.1-201ENST00000579003 1625 ntBASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGA9Q9Y5G4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 CROCCP5-201ENST00000436658 830 ntBASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms