Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 KRT18P5-201ENST00000436075 1291 ntBASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 MIR6084-201ENST00000622012 110 ntBASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 OXCT2P1-201ENST00000447263 1535 ntBASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
KDM3AQ9Y4C1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.36■■□□□ 1.49
KDM3AQ9Y4C1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KDM3AQ9Y4C1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.36■■□□□ 1.49
KDM3AQ9Y4C1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KDM3AQ9Y4C1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KDM3AQ9Y4C1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.36■■□□□ 1.49
KDM3AQ9Y4C1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
KDM3AQ9Y4C1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.36■■□□□ 1.49
KDM3AQ9Y4C1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.36■■□□□ 1.49
KDM3AQ9Y4C1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KDM3AQ9Y4C1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
KDM3AQ9Y4C1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.35■■□□□ 1.49
KDM3AQ9Y4C1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
KDM3AQ9Y4C1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KDM3AQ9Y4C1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KDM3AQ9Y4C1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
KDM3AQ9Y4C1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KDM3AQ9Y4C1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KDM3AQ9Y4C1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.34■■□□□ 1.49
KDM3AQ9Y4C1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.34■■□□□ 1.49
KDM3AQ9Y4C1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KDM3AQ9Y4C1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.34■■□□□ 1.49
KDM3AQ9Y4C1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.34■■□□□ 1.49
KDM3AQ9Y4C1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
KDM3AQ9Y4C1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC24.33■■□□□ 1.49
KDM3AQ9Y4C1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.33■■□□□ 1.49
KDM3AQ9Y4C1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
KDM3AQ9Y4C1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.33■■□□□ 1.48
KDM3AQ9Y4C1 CCDC92B-201ENST00000575506 885 ntBASIC24.33■■□□□ 1.48
KDM3AQ9Y4C1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.33■■□□□ 1.48
KDM3AQ9Y4C1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.33■■□□□ 1.48
KDM3AQ9Y4C1 LINC00526-201ENST00000581067 1875 ntBASIC24.32■■□□□ 1.48
KDM3AQ9Y4C1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
KDM3AQ9Y4C1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
KDM3AQ9Y4C1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
KDM3AQ9Y4C1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.32■■□□□ 1.48
KDM3AQ9Y4C1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
KDM3AQ9Y4C1 TERF1P2-201ENST00000583350 1212 ntBASIC24.32■■□□□ 1.48
KDM3AQ9Y4C1 AC022517.1-201ENST00000592429 346 ntBASIC24.32■■□□□ 1.48
KDM3AQ9Y4C1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.32■■□□□ 1.48
KDM3AQ9Y4C1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.32■■□□□ 1.48
KDM3AQ9Y4C1 AC092053.2-201ENST00000640557 1818 ntBASIC24.32■■□□□ 1.48
KDM3AQ9Y4C1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.31■■□□□ 1.48
KDM3AQ9Y4C1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.31■■□□□ 1.48
KDM3AQ9Y4C1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
KDM3AQ9Y4C1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.31■■□□□ 1.48
KDM3AQ9Y4C1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
KDM3AQ9Y4C1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.31■■□□□ 1.48
KDM3AQ9Y4C1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
KDM3AQ9Y4C1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.31■■□□□ 1.48
KDM3AQ9Y4C1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
KDM3AQ9Y4C1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.3■■□□□ 1.48
KDM3AQ9Y4C1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
KDM3AQ9Y4C1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
KDM3AQ9Y4C1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
KDM3AQ9Y4C1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.3■■□□□ 1.48
KDM3AQ9Y4C1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
KDM3AQ9Y4C1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms