Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 AC068338.2-201ENST00000563278 1430 ntBASIC21.91■■□□□ 1.1
SIT1Q9Y3P8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIT1Q9Y3P8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SIT1Q9Y3P8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SIT1Q9Y3P8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SIT1Q9Y3P8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.91■■□□□ 1.1
SIT1Q9Y3P8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 AC055733.4-201ENST00000638462 1354 ntBASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 CYP2T1P-201ENST00000432607 1285 ntBASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 GCSHP5-201ENST00000443090 522 ntBASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 RARRES2P4-201ENST00000514074 484 ntBASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 AC092118.2-201ENST00000613495 667 ntBASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 OR10C1-204ENST00000622521 1039 ntBASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.9■■□□□ 1.1
SIT1Q9Y3P8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SIT1Q9Y3P8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIT1Q9Y3P8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SIT1Q9Y3P8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.89■■□□□ 1.09
SIT1Q9Y3P8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.89■■□□□ 1.09
SIT1Q9Y3P8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.89■■□□□ 1.09
SIT1Q9Y3P8 AC008694.1-202ENST00000636953 945 ntBASIC21.89■■□□□ 1.09
SIT1Q9Y3P8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIT1Q9Y3P8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SIT1Q9Y3P8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 ESRRAP1-201ENST00000400596 1257 ntBASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 DUSP8P3-201ENST00000399571 1760 ntBASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SIT1Q9Y3P8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SIT1Q9Y3P8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SIT1Q9Y3P8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SIT1Q9Y3P8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.87■■□□□ 1.09
SIT1Q9Y3P8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.87■■□□□ 1.09
SIT1Q9Y3P8 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.87■■□□□ 1.09
SIT1Q9Y3P8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SIT1Q9Y3P8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.87■■□□□ 1.09
SIT1Q9Y3P8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SIT1Q9Y3P8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SIT1Q9Y3P8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SIT1Q9Y3P8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SIT1Q9Y3P8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SIT1Q9Y3P8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SIT1Q9Y3P8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SIT1Q9Y3P8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.86■■□□□ 1.09
SIT1Q9Y3P8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.86■■□□□ 1.09
SIT1Q9Y3P8 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.86■■□□□ 1.09
SIT1Q9Y3P8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.86■■□□□ 1.09
SIT1Q9Y3P8 AL158047.1-201ENST00000445918 881 ntBASIC21.86■■□□□ 1.09
SIT1Q9Y3P8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.86■■□□□ 1.09
SIT1Q9Y3P8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SIT1Q9Y3P8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SIT1Q9Y3P8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SIT1Q9Y3P8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 AL512625.2-201ENST00000417533 625 ntBASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 RPS2P4-201ENST00000476944 856 ntBASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 AC069236.1-201ENST00000604339 616 ntBASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIT1Q9Y3P8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SIT1Q9Y3P8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.84■■□□□ 1.09
SIT1Q9Y3P8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SIT1Q9Y3P8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIT1Q9Y3P8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms