Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 C17orf82-201ENST00000623772 1530 ntBASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT11Q9UKZ1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.68■□□□□ 0.9
CNOT11Q9UKZ1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.68■□□□□ 0.9
CNOT11Q9UKZ1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT11Q9UKZ1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.68■□□□□ 0.9
CNOT11Q9UKZ1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.68■□□□□ 0.9
CNOT11Q9UKZ1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.68■□□□□ 0.9
CNOT11Q9UKZ1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CNOT11Q9UKZ1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT11Q9UKZ1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.68■□□□□ 0.9
CNOT11Q9UKZ1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT11Q9UKZ1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 AC096631.2-201ENST00000436136 790 ntBASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT11Q9UKZ1 PKD1P6-201ENST00000343738 4769 ntBASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 AC110285.6-201ENST00000617652 491 ntBASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CNOT11Q9UKZ1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 LINC01521-201ENST00000504184 1943 ntBASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 AL139246.5-201ENST00000606645 996 ntBASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT11Q9UKZ1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.64■□□□□ 0.9
CNOT11Q9UKZ1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNOT11Q9UKZ1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.64■□□□□ 0.9
CNOT11Q9UKZ1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNOT11Q9UKZ1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNOT11Q9UKZ1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CNOT11Q9UKZ1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNOT11Q9UKZ1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNOT11Q9UKZ1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNOT11Q9UKZ1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.64■□□□□ 0.89
CNOT11Q9UKZ1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.64■□□□□ 0.89
CNOT11Q9UKZ1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT11Q9UKZ1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT11Q9UKZ1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT11Q9UKZ1 AC244015.2-201ENST00000616358 1861 ntBASIC20.64■□□□□ 0.89
CNOT11Q9UKZ1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT11Q9UKZ1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT11Q9UKZ1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT11Q9UKZ1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT11Q9UKZ1 AC099791.2-201ENST00000605725 427 ntBASIC20.63■□□□□ 0.89
CNOT11Q9UKZ1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT11Q9UKZ1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT11Q9UKZ1 AL353803.4-201ENST00000565882 1934 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms