Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TREM2Q9NZC2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TREM2Q9NZC2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TREM2Q9NZC2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TREM2Q9NZC2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TREM2Q9NZC2 AC097381.1-201ENST00000429019 1296 ntBASIC18.57■□□□□ 0.56
TREM2Q9NZC2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.57■□□□□ 0.56
TREM2Q9NZC2 AC087623.3-201ENST00000607047 1098 ntBASIC18.57■□□□□ 0.56
TREM2Q9NZC2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TREM2Q9NZC2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.57■□□□□ 0.56
TREM2Q9NZC2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.57■□□□□ 0.56
TREM2Q9NZC2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TREM2Q9NZC2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TREM2Q9NZC2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.57■□□□□ 0.56
TREM2Q9NZC2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TREM2Q9NZC2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TREM2Q9NZC2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.55■□□□□ 0.56
TREM2Q9NZC2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.55■□□□□ 0.56
TREM2Q9NZC2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 IGHV3-19-201ENST00000521488 291 ntBASIC18.54■□□□□ 0.56
TREM2Q9NZC2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 EP400NL-214ENST00000641289 2402 ntBASIC18.54■□□□□ 0.56
TREM2Q9NZC2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TREM2Q9NZC2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
TREM2Q9NZC2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.52■□□□□ 0.56
TREM2Q9NZC2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TREM2Q9NZC2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.52■□□□□ 0.56
TREM2Q9NZC2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms