Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 MIR3181-201ENST00000578512 73 ntBASIC20.1■□□□□ 0.81
RLIMQ9NVW2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RLIMQ9NVW2 AC005229.4-201ENST00000610085 2198 ntBASIC20.1■□□□□ 0.81
RLIMQ9NVW2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RLIMQ9NVW2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RLIMQ9NVW2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RLIMQ9NVW2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.09■□□□□ 0.81
RLIMQ9NVW2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RLIMQ9NVW2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.09■□□□□ 0.81
RLIMQ9NVW2 MIR4466-201ENST00000606121 54 ntBASIC20.09■□□□□ 0.81
RLIMQ9NVW2 CA15P2-201ENST00000611168 834 ntBASIC20.09■□□□□ 0.81
RLIMQ9NVW2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.09■□□□□ 0.81
RLIMQ9NVW2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.09■□□□□ 0.81
RLIMQ9NVW2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.09■□□□□ 0.81
RLIMQ9NVW2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.09■□□□□ 0.81
RLIMQ9NVW2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RLIMQ9NVW2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RLIMQ9NVW2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RLIMQ9NVW2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.08■□□□□ 0.81
RLIMQ9NVW2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RLIMQ9NVW2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RLIMQ9NVW2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RLIMQ9NVW2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RLIMQ9NVW2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RLIMQ9NVW2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RLIMQ9NVW2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RLIMQ9NVW2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RLIMQ9NVW2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RLIMQ9NVW2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RLIMQ9NVW2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RLIMQ9NVW2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RLIMQ9NVW2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RLIMQ9NVW2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
RLIMQ9NVW2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.07■□□□□ 0.8
RLIMQ9NVW2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RLIMQ9NVW2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.07■□□□□ 0.8
RLIMQ9NVW2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.07■□□□□ 0.8
RLIMQ9NVW2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.07■□□□□ 0.8
RLIMQ9NVW2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
RLIMQ9NVW2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RLIMQ9NVW2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RLIMQ9NVW2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.06■□□□□ 0.8
RLIMQ9NVW2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RLIMQ9NVW2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RLIMQ9NVW2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.06■□□□□ 0.8
RLIMQ9NVW2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.06■□□□□ 0.8
RLIMQ9NVW2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RLIMQ9NVW2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RLIMQ9NVW2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RLIMQ9NVW2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
RLIMQ9NVW2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RLIMQ9NVW2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.06■□□□□ 0.8
RLIMQ9NVW2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RLIMQ9NVW2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.05■□□□□ 0.8
RLIMQ9NVW2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RLIMQ9NVW2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RLIMQ9NVW2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.05■□□□□ 0.8
RLIMQ9NVW2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RLIMQ9NVW2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RLIMQ9NVW2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RLIMQ9NVW2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RLIMQ9NVW2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RLIMQ9NVW2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
RLIMQ9NVW2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.05■□□□□ 0.8
RLIMQ9NVW2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.05■□□□□ 0.8
RLIMQ9NVW2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RLIMQ9NVW2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RLIMQ9NVW2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RLIMQ9NVW2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RLIMQ9NVW2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RLIMQ9NVW2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RLIMQ9NVW2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RLIMQ9NVW2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.04■□□□□ 0.8
RLIMQ9NVW2 AC131281.2-201ENST00000520478 145 ntBASIC20.04■□□□□ 0.8
RLIMQ9NVW2 AL031602.1-201ENST00000633169 911 ntBASIC20.04■□□□□ 0.8
RLIMQ9NVW2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RLIMQ9NVW2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RLIMQ9NVW2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RLIMQ9NVW2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.03■□□□□ 0.8
RLIMQ9NVW2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.03■□□□□ 0.8
RLIMQ9NVW2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RLIMQ9NVW2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms