Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE1Q9NRR8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC11.21□□□□□ -0.61
CDC42SE1Q9NRR8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
CDC42SE1Q9NRR8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE1Q9NRR8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
CDC42SE1Q9NRR8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE1Q9NRR8 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC11.2□□□□□ -0.62
CDC42SE1Q9NRR8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE1Q9NRR8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 FAM99A-202ENST00000538190 1989 ntBASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms