Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DDX47Q9H0S4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DDX47Q9H0S4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DDX47Q9H0S4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.49■■□□□ 1.19
DDX47Q9H0S4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX47Q9H0S4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX47Q9H0S4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX47Q9H0S4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX47Q9H0S4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
DDX47Q9H0S4 AC026471.6-201ENST00000622954 1905 ntBASIC22.47■■□□□ 1.19
DDX47Q9H0S4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX47Q9H0S4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX47Q9H0S4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DDX47Q9H0S4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX47Q9H0S4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.47■■□□□ 1.19
DDX47Q9H0S4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX47Q9H0S4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DDX47Q9H0S4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.47■■□□□ 1.19
DDX47Q9H0S4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX47Q9H0S4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
DDX47Q9H0S4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.45■■□□□ 1.19
DDX47Q9H0S4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
DDX47Q9H0S4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
DDX47Q9H0S4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.45■■□□□ 1.18
DDX47Q9H0S4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.45■■□□□ 1.18
DDX47Q9H0S4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX47Q9H0S4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.45■■□□□ 1.18
DDX47Q9H0S4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
DDX47Q9H0S4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX47Q9H0S4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.45■■□□□ 1.18
DDX47Q9H0S4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
DDX47Q9H0S4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.45■■□□□ 1.18
DDX47Q9H0S4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DDX47Q9H0S4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DDX47Q9H0S4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DDX47Q9H0S4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DDX47Q9H0S4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
DDX47Q9H0S4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.44■■□□□ 1.18
DDX47Q9H0S4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.44■■□□□ 1.18
DDX47Q9H0S4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.44■■□□□ 1.18
DDX47Q9H0S4 AL499627.2-201ENST00000606283 725 ntBASIC22.44■■□□□ 1.18
DDX47Q9H0S4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
DDX47Q9H0S4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DDX47Q9H0S4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.44■■□□□ 1.18
DDX47Q9H0S4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
DDX47Q9H0S4 AL157384.1-201ENST00000445995 2473 ntBASIC22.43■■□□□ 1.18
DDX47Q9H0S4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 MTDHP2-201ENST00000601468 714 ntBASIC22.43■■□□□ 1.18
DDX47Q9H0S4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX47Q9H0S4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms