Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CLPTM1LQ96KA5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1LQ96KA5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1LQ96KA5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.72■□□□□ 0.91
CLPTM1LQ96KA5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CLPTM1LQ96KA5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.72■□□□□ 0.91
CLPTM1LQ96KA5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1LQ96KA5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1LQ96KA5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1LQ96KA5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1LQ96KA5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.72■□□□□ 0.91
CLPTM1LQ96KA5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.72■□□□□ 0.91
CLPTM1LQ96KA5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1LQ96KA5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.71■□□□□ 0.91
CLPTM1LQ96KA5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.71■□□□□ 0.91
CLPTM1LQ96KA5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPTM1LQ96KA5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPTM1LQ96KA5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.71■□□□□ 0.91
CLPTM1LQ96KA5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPTM1LQ96KA5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.71■□□□□ 0.91
CLPTM1LQ96KA5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPTM1LQ96KA5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPTM1LQ96KA5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
CLPTM1LQ96KA5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.7■□□□□ 0.91
CLPTM1LQ96KA5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 AC120024.1-201ENST00000562672 995 ntBASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLPTM1LQ96KA5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.69■□□□□ 0.9
CLPTM1LQ96KA5 FEM1AP1-201ENST00000431297 1995 ntBASIC20.69■□□□□ 0.9
CLPTM1LQ96KA5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1LQ96KA5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1LQ96KA5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1LQ96KA5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
CLPTM1LQ96KA5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1LQ96KA5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLPTM1LQ96KA5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CLPTM1LQ96KA5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
CLPTM1LQ96KA5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 CA15P2-201ENST00000611168 834 ntBASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLPTM1LQ96KA5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1LQ96KA5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1LQ96KA5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.67■□□□□ 0.9
CLPTM1LQ96KA5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CLPTM1LQ96KA5 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CLPTM1LQ96KA5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1LQ96KA5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CLPTM1LQ96KA5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.67■□□□□ 0.9
CLPTM1LQ96KA5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1LQ96KA5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPTM1LQ96KA5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CLPTM1LQ96KA5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
CLPTM1LQ96KA5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CLPTM1LQ96KA5 AC026471.6-201ENST00000622954 1905 ntBASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 MIR4449-201ENST00000578365 66 ntBASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPTM1LQ96KA5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLPTM1LQ96KA5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPTM1LQ96KA5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms