Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC58Q96CX6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC58Q96CX6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC58Q96CX6 AC012354.3-201ENST00000623734 483 ntBASIC20.53■□□□□ 0.88
LRRC58Q96CX6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC58Q96CX6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC58Q96CX6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC58Q96CX6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC58Q96CX6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC58Q96CX6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC58Q96CX6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC58Q96CX6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC58Q96CX6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LRRC58Q96CX6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC58Q96CX6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC58Q96CX6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC58Q96CX6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
LRRC58Q96CX6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LRRC58Q96CX6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRC58Q96CX6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC58Q96CX6 AL033527.3-201ENST00000566366 1196 ntBASIC20.52■□□□□ 0.88
LRRC58Q96CX6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRC58Q96CX6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC58Q96CX6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC58Q96CX6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRC58Q96CX6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC58Q96CX6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC58Q96CX6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC58Q96CX6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 BX664725.1-201ENST00000438252 379 ntBASIC20.51■□□□□ 0.87
LRRC58Q96CX6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 C17orf82-201ENST00000623772 1530 ntBASIC20.51■□□□□ 0.87
LRRC58Q96CX6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC58Q96CX6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRC58Q96CX6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC58Q96CX6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC58Q96CX6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC58Q96CX6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
LRRC58Q96CX6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
LRRC58Q96CX6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LRRC58Q96CX6 AL499627.2-201ENST00000606283 725 ntBASIC20.49■□□□□ 0.87
LRRC58Q96CX6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRC58Q96CX6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRC58Q96CX6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LRRC58Q96CX6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC58Q96CX6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC58Q96CX6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.48■□□□□ 0.87
LRRC58Q96CX6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC58Q96CX6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC58Q96CX6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.48■□□□□ 0.87
LRRC58Q96CX6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC58Q96CX6 AC092028.1-203ENST00000608262 953 ntBASIC20.48■□□□□ 0.87
LRRC58Q96CX6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC58Q96CX6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC58Q96CX6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC58Q96CX6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
LRRC58Q96CX6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC58Q96CX6 AC026471.6-201ENST00000622954 1905 ntBASIC20.47■□□□□ 0.87
LRRC58Q96CX6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRC58Q96CX6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC58Q96CX6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC58Q96CX6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC58Q96CX6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC58Q96CX6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms