Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS33AQ96AX1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 KRT125P-201ENST00000546827 989 ntBASIC20.71■□□□□ 0.91
VPS33AQ96AX1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
VPS33AQ96AX1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
VPS33AQ96AX1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
VPS33AQ96AX1 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.7■□□□□ 0.9
VPS33AQ96AX1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS33AQ96AX1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS33AQ96AX1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS33AQ96AX1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS33AQ96AX1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS33AQ96AX1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS33AQ96AX1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
VPS33AQ96AX1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS33AQ96AX1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS33AQ96AX1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS33AQ96AX1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.69■□□□□ 0.9
VPS33AQ96AX1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS33AQ96AX1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS33AQ96AX1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
VPS33AQ96AX1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS33AQ96AX1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS33AQ96AX1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS33AQ96AX1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 MIR4787-201ENST00000607364 84 ntBASIC20.68■□□□□ 0.9
VPS33AQ96AX1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS33AQ96AX1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS33AQ96AX1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS33AQ96AX1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
VPS33AQ96AX1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS33AQ96AX1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS33AQ96AX1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS33AQ96AX1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS33AQ96AX1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS33AQ96AX1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
VPS33AQ96AX1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
VPS33AQ96AX1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VPS33AQ96AX1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS33AQ96AX1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.67■□□□□ 0.9
VPS33AQ96AX1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VPS33AQ96AX1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 Z92544.1-202ENST00000571933 1220 ntBASIC20.66■□□□□ 0.9
VPS33AQ96AX1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
VPS33AQ96AX1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VPS33AQ96AX1 Z98882.1-201ENST00000622160 2253 ntBASIC20.65■□□□□ 0.9
VPS33AQ96AX1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS33AQ96AX1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
VPS33AQ96AX1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.65■□□□□ 0.9
VPS33AQ96AX1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS33AQ96AX1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.65■□□□□ 0.9
VPS33AQ96AX1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.65■□□□□ 0.9
VPS33AQ96AX1 AL499627.2-201ENST00000606283 725 ntBASIC20.65■□□□□ 0.9
VPS33AQ96AX1 AC010997.5-201ENST00000609182 354 ntBASIC20.65■□□□□ 0.9
VPS33AQ96AX1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS33AQ96AX1 AF106564.1-201ENST00000607058 2553 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms