Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.72■□□□□ 0.59
APOBEC3DQ96AK3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOBEC3DQ96AK3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
APOBEC3DQ96AK3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOBEC3DQ96AK3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOBEC3DQ96AK3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOBEC3DQ96AK3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOBEC3DQ96AK3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
APOBEC3DQ96AK3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOBEC3DQ96AK3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
APOBEC3DQ96AK3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOBEC3DQ96AK3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOBEC3DQ96AK3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOBEC3DQ96AK3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
APOBEC3DQ96AK3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOBEC3DQ96AK3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOBEC3DQ96AK3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOBEC3DQ96AK3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
APOBEC3DQ96AK3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
APOBEC3DQ96AK3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.71■□□□□ 0.59
APOBEC3DQ96AK3 C11orf96-202ENST00000528572 1834 ntBASIC18.71■□□□□ 0.59
APOBEC3DQ96AK3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.71■□□□□ 0.59
APOBEC3DQ96AK3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 RASA4CP-201ENST00000424092 1398 ntBASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 AF213884.3-201ENST00000563833 479 ntBASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APOBEC3DQ96AK3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 MIR939-201ENST00000401314 82 ntBASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 AC091305.1-201ENST00000479476 895 ntBASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
APOBEC3DQ96AK3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOBEC3DQ96AK3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOBEC3DQ96AK3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOBEC3DQ96AK3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.67■□□□□ 0.58
APOBEC3DQ96AK3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOBEC3DQ96AK3 AL034346.1-201ENST00000568244 1277 ntBASIC18.67■□□□□ 0.58
APOBEC3DQ96AK3 AL031432.3-201ENST00000607698 485 ntBASIC18.67■□□□□ 0.58
APOBEC3DQ96AK3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOBEC3DQ96AK3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.67■□□□□ 0.58
APOBEC3DQ96AK3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
APOBEC3DQ96AK3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.66■□□□□ 0.58
APOBEC3DQ96AK3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOBEC3DQ96AK3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOBEC3DQ96AK3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOBEC3DQ96AK3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOBEC3DQ96AK3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOBEC3DQ96AK3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.66■□□□□ 0.58
APOBEC3DQ96AK3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOBEC3DQ96AK3 SUDS3P1-201ENST00000505831 966 ntBASIC18.66■□□□□ 0.58
APOBEC3DQ96AK3 AL136967.2-201ENST00000623968 743 ntBASIC18.66■□□□□ 0.58
APOBEC3DQ96AK3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
APOBEC3DQ96AK3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms