Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 IGHV3-19-201ENST00000521488 291 ntBASIC18.89■□□□□ 0.61
CPEB3Q8NE35 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 AC019069.1-201ENST00000610008 1333 ntBASIC18.89■□□□□ 0.61
CPEB3Q8NE35 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.89■□□□□ 0.61
CPEB3Q8NE35 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.88■□□□□ 0.61
CPEB3Q8NE35 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 TSPY26P-201ENST00000476365 1326 ntBASIC18.87■□□□□ 0.61
CPEB3Q8NE35 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPEB3Q8NE35 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPEB3Q8NE35 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 AC092053.2-201ENST00000640557 1818 ntBASIC18.85■□□□□ 0.61
CPEB3Q8NE35 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPEB3Q8NE35 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPEB3Q8NE35 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPEB3Q8NE35 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CPEB3Q8NE35 OR7E47P-201ENST00000546390 1422 ntBASIC18.84■□□□□ 0.61
CPEB3Q8NE35 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPEB3Q8NE35 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPEB3Q8NE35 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPEB3Q8NE35 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.84■□□□□ 0.61
CPEB3Q8NE35 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPEB3Q8NE35 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPEB3Q8NE35 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms