Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.29■■□□□ 1
EFCAB3Q8N7B9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.29■■□□□ 1
EFCAB3Q8N7B9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFCAB3Q8N7B9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
EFCAB3Q8N7B9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
EFCAB3Q8N7B9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
EFCAB3Q8N7B9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.29■■□□□ 1
EFCAB3Q8N7B9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFCAB3Q8N7B9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFCAB3Q8N7B9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.29■■□□□ 1
EFCAB3Q8N7B9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.29■■□□□ 1
EFCAB3Q8N7B9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.29■■□□□ 1
EFCAB3Q8N7B9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.28■■□□□ 1
EFCAB3Q8N7B9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFCAB3Q8N7B9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFCAB3Q8N7B9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFCAB3Q8N7B9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.28■■□□□ 1
EFCAB3Q8N7B9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFCAB3Q8N7B9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.28■■□□□ 1
EFCAB3Q8N7B9 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC21.28■■□□□ 1
EFCAB3Q8N7B9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFCAB3Q8N7B9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFCAB3Q8N7B9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.28■■□□□ 1
EFCAB3Q8N7B9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.28■■□□□ 1
EFCAB3Q8N7B9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFCAB3Q8N7B9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.28■■□□□ 1
EFCAB3Q8N7B9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.27■■□□□ 1
EFCAB3Q8N7B9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.27■■□□□ 1
EFCAB3Q8N7B9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.27■■□□□ 1
EFCAB3Q8N7B9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EFCAB3Q8N7B9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.27■■□□□ 1
EFCAB3Q8N7B9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.27■■□□□ 1
EFCAB3Q8N7B9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
EFCAB3Q8N7B9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.27■■□□□ 1
EFCAB3Q8N7B9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.27■■□□□ 1
EFCAB3Q8N7B9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EFCAB3Q8N7B9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.27■■□□□ 1
EFCAB3Q8N7B9 AC105265.2-201ENST00000467189 838 ntBASIC21.27■■□□□ 1
EFCAB3Q8N7B9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.27■■□□□ 1
EFCAB3Q8N7B9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.27■■□□□ 1
EFCAB3Q8N7B9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
EFCAB3Q8N7B9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EFCAB3Q8N7B9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
EFCAB3Q8N7B9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
EFCAB3Q8N7B9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EFCAB3Q8N7B9 AL353803.4-201ENST00000565882 1934 ntBASIC21.26■□□□□ 0.99
EFCAB3Q8N7B9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.26■□□□□ 0.99
EFCAB3Q8N7B9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
EFCAB3Q8N7B9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
EFCAB3Q8N7B9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.26■□□□□ 0.99
EFCAB3Q8N7B9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.26■□□□□ 0.99
EFCAB3Q8N7B9 AC009102.2-201ENST00000606772 1639 ntBASIC21.26■□□□□ 0.99
EFCAB3Q8N7B9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCAB3Q8N7B9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCAB3Q8N7B9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.25■□□□□ 0.99
EFCAB3Q8N7B9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCAB3Q8N7B9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.25■□□□□ 0.99
EFCAB3Q8N7B9 AC024257.2-201ENST00000549699 147 ntBASIC21.25■□□□□ 0.99
EFCAB3Q8N7B9 AL031432.3-201ENST00000607698 485 ntBASIC21.25■□□□□ 0.99
EFCAB3Q8N7B9 AC005229.4-201ENST00000610085 2198 ntBASIC21.25■□□□□ 0.99
EFCAB3Q8N7B9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCAB3Q8N7B9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFCAB3Q8N7B9 AC073130.3-201ENST00000624389 2278 ntBASIC21.25■□□□□ 0.99
EFCAB3Q8N7B9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFCAB3Q8N7B9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFCAB3Q8N7B9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EFCAB3Q8N7B9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFCAB3Q8N7B9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFCAB3Q8N7B9 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC21.24■□□□□ 0.99
EFCAB3Q8N7B9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.24■□□□□ 0.99
EFCAB3Q8N7B9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EFCAB3Q8N7B9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.24■□□□□ 0.99
EFCAB3Q8N7B9 FAM99A-202ENST00000538190 1989 ntBASIC21.24■□□□□ 0.99
EFCAB3Q8N7B9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFCAB3Q8N7B9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
EFCAB3Q8N7B9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFCAB3Q8N7B9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.24■□□□□ 0.99
EFCAB3Q8N7B9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.23■□□□□ 0.99
EFCAB3Q8N7B9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EFCAB3Q8N7B9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
EFCAB3Q8N7B9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EFCAB3Q8N7B9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.23■□□□□ 0.99
EFCAB3Q8N7B9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.23■□□□□ 0.99
EFCAB3Q8N7B9 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.23■□□□□ 0.99
EFCAB3Q8N7B9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFCAB3Q8N7B9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFCAB3Q8N7B9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFCAB3Q8N7B9 AC087742.1-201ENST00000575880 1738 ntBASIC21.23■□□□□ 0.99
EFCAB3Q8N7B9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.23■□□□□ 0.99
EFCAB3Q8N7B9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
EFCAB3Q8N7B9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms