Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
TTC39CQ8N584 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.01■■□□□ 1.27
TTC39CQ8N584 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
TTC39CQ8N584 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39CQ8N584 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39CQ8N584 BX005040.4-201ENST00000637145 1518 ntBASIC23.01■■□□□ 1.27
TTC39CQ8N584 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.01■■□□□ 1.27
TTC39CQ8N584 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39CQ8N584 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
TTC39CQ8N584 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39CQ8N584 AC009237.3-201ENST00000393279 1427 ntBASIC23■■□□□ 1.27
TTC39CQ8N584 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39CQ8N584 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23■■□□□ 1.27
TTC39CQ8N584 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23■■□□□ 1.27
TTC39CQ8N584 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23■■□□□ 1.27
TTC39CQ8N584 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23■■□□□ 1.27
TTC39CQ8N584 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23■■□□□ 1.27
TTC39CQ8N584 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39CQ8N584 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39CQ8N584 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.99■■□□□ 1.27
TTC39CQ8N584 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
TTC39CQ8N584 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39CQ8N584 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39CQ8N584 ZNRF2P3-201ENST00000424200 374 ntBASIC22.99■■□□□ 1.27
TTC39CQ8N584 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.99■■□□□ 1.27
TTC39CQ8N584 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.99■■□□□ 1.27
TTC39CQ8N584 AP004607.7-201ENST00000527152 1677 ntBASIC22.99■■□□□ 1.27
TTC39CQ8N584 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39CQ8N584 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39CQ8N584 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
TTC39CQ8N584 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39CQ8N584 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39CQ8N584 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
TTC39CQ8N584 AC027612.3-201ENST00000413684 1047 ntBASIC22.98■■□□□ 1.27
TTC39CQ8N584 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39CQ8N584 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39CQ8N584 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
TTC39CQ8N584 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39CQ8N584 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39CQ8N584 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
TTC39CQ8N584 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
TTC39CQ8N584 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39CQ8N584 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39CQ8N584 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.97■■□□□ 1.27
TTC39CQ8N584 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.97■■□□□ 1.27
TTC39CQ8N584 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39CQ8N584 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.97■■□□□ 1.27
TTC39CQ8N584 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39CQ8N584 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.97■■□□□ 1.27
TTC39CQ8N584 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39CQ8N584 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.97■■□□□ 1.27
TTC39CQ8N584 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39CQ8N584 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.97■■□□□ 1.27
TTC39CQ8N584 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39CQ8N584 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
TTC39CQ8N584 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39CQ8N584 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39CQ8N584 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39CQ8N584 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.97■■□□□ 1.27
TTC39CQ8N584 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
TTC39CQ8N584 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.96■■□□□ 1.27
TTC39CQ8N584 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.96■■□□□ 1.27
TTC39CQ8N584 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
TTC39CQ8N584 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39CQ8N584 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.96■■□□□ 1.27
TTC39CQ8N584 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
TTC39CQ8N584 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TTC39CQ8N584 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TTC39CQ8N584 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
TTC39CQ8N584 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TTC39CQ8N584 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.95■■□□□ 1.26
TTC39CQ8N584 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.95■■□□□ 1.26
TTC39CQ8N584 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.95■■□□□ 1.26
TTC39CQ8N584 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TTC39CQ8N584 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.95■■□□□ 1.26
TTC39CQ8N584 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TTC39CQ8N584 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.94■■□□□ 1.26
TTC39CQ8N584 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.94■■□□□ 1.26
TTC39CQ8N584 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TTC39CQ8N584 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TTC39CQ8N584 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
TTC39CQ8N584 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.94■■□□□ 1.26
TTC39CQ8N584 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
TTC39CQ8N584 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms