Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AFG3L1P-217ENST00000557444 2447 ntBASIC18.97■□□□□ 0.63
LYSMD2Q8IV50 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD2Q8IV50 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD2Q8IV50 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD2Q8IV50 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD2Q8IV50 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD2Q8IV50 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD2Q8IV50 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD2Q8IV50 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LYSMD2Q8IV50 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD2Q8IV50 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.96■□□□□ 0.63
LYSMD2Q8IV50 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD2Q8IV50 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.96■□□□□ 0.63
LYSMD2Q8IV50 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD2Q8IV50 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.96■□□□□ 0.63
LYSMD2Q8IV50 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.96■□□□□ 0.63
LYSMD2Q8IV50 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.96■□□□□ 0.63
LYSMD2Q8IV50 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD2Q8IV50 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD2Q8IV50 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.96■□□□□ 0.63
LYSMD2Q8IV50 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.96■□□□□ 0.63
LYSMD2Q8IV50 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
LYSMD2Q8IV50 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 AC009831.1-201ENST00000580420 1582 ntBASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.95■□□□□ 0.62
LYSMD2Q8IV50 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 MIR639-201ENST00000384974 98 ntBASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 AC133552.2-201ENST00000619106 1032 ntBASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 AC131274.2-201ENST00000580697 1507 ntBASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD2Q8IV50 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LYSMD2Q8IV50 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD2Q8IV50 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LYSMD2Q8IV50 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD2Q8IV50 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD2Q8IV50 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD2Q8IV50 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD2Q8IV50 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.93■□□□□ 0.62
LYSMD2Q8IV50 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
LYSMD2Q8IV50 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD2Q8IV50 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD2Q8IV50 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD2Q8IV50 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD2Q8IV50 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD2Q8IV50 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.92■□□□□ 0.62
LYSMD2Q8IV50 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD2Q8IV50 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LYSMD2Q8IV50 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD2Q8IV50 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD2Q8IV50 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD2Q8IV50 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD2Q8IV50 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD2Q8IV50 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD2Q8IV50 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD2Q8IV50 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LYSMD2Q8IV50 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD2Q8IV50 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD2Q8IV50 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LYSMD2Q8IV50 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD2Q8IV50 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LYSMD2Q8IV50 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD2Q8IV50 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.91■□□□□ 0.62
LYSMD2Q8IV50 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD2Q8IV50 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD2Q8IV50 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD2Q8IV50 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD2Q8IV50 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LYSMD2Q8IV50 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.9■□□□□ 0.62
LYSMD2Q8IV50 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD2Q8IV50 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD2Q8IV50 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD2Q8IV50 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LYSMD2Q8IV50 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD2Q8IV50 AC144652.1-201ENST00000609974 1624 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms