Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF180Q86T96 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.13■■□□□ 1.45
RNF180Q86T96 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.13■■□□□ 1.45
RNF180Q86T96 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF180Q86T96 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.13■■□□□ 1.45
RNF180Q86T96 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF180Q86T96 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF180Q86T96 AC138907.5-202ENST00000569484 235 ntBASIC24.13■■□□□ 1.45
RNF180Q86T96 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RNF180Q86T96 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.13■■□□□ 1.45
RNF180Q86T96 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RNF180Q86T96 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF180Q86T96 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF180Q86T96 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF180Q86T96 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
RNF180Q86T96 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
RNF180Q86T96 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF180Q86T96 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF180Q86T96 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF180Q86T96 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
RNF180Q86T96 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RNF180Q86T96 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.12■■□□□ 1.45
RNF180Q86T96 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.12■■□□□ 1.45
RNF180Q86T96 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.12■■□□□ 1.45
RNF180Q86T96 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.12■■□□□ 1.45
RNF180Q86T96 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.12■■□□□ 1.45
RNF180Q86T96 MIR4758-201ENST00000577688 71 ntBASIC24.12■■□□□ 1.45
RNF180Q86T96 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.12■■□□□ 1.45
RNF180Q86T96 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF180Q86T96 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
RNF180Q86T96 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.12■■□□□ 1.45
RNF180Q86T96 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
RNF180Q86T96 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF180Q86T96 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF180Q86T96 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF180Q86T96 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.11■■□□□ 1.45
RNF180Q86T96 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.11■■□□□ 1.45
RNF180Q86T96 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
RNF180Q86T96 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.11■■□□□ 1.45
RNF180Q86T96 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RNF180Q86T96 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF180Q86T96 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.1■■□□□ 1.45
RNF180Q86T96 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
RNF180Q86T96 DUSP8P5-201ENST00000422884 1815 ntBASIC24.1■■□□□ 1.45
RNF180Q86T96 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF180Q86T96 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.1■■□□□ 1.45
RNF180Q86T96 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF180Q86T96 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF180Q86T96 AC098934.4-201ENST00000564127 592 ntBASIC24.1■■□□□ 1.45
RNF180Q86T96 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
RNF180Q86T96 AC013268.1-206ENST00000638368 961 ntBASIC24.1■■□□□ 1.45
RNF180Q86T96 AC112229.1-201ENST00000639295 961 ntBASIC24.1■■□□□ 1.45
RNF180Q86T96 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
RNF180Q86T96 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF180Q86T96 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
RNF180Q86T96 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF180Q86T96 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF180Q86T96 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF180Q86T96 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.09■■□□□ 1.45
RNF180Q86T96 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RNF180Q86T96 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RNF180Q86T96 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RNF180Q86T96 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RNF180Q86T96 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF180Q86T96 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
RNF180Q86T96 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
RNF180Q86T96 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RNF180Q86T96 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RNF180Q86T96 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.08■■□□□ 1.45
RNF180Q86T96 POU5F1P3-201ENST00000428824 1078 ntBASIC24.08■■□□□ 1.45
RNF180Q86T96 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.08■■□□□ 1.45
RNF180Q86T96 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.08■■□□□ 1.45
RNF180Q86T96 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF180Q86T96 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF180Q86T96 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
RNF180Q86T96 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF180Q86T96 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.07■■□□□ 1.44
RNF180Q86T96 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.07■■□□□ 1.44
RNF180Q86T96 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF180Q86T96 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF180Q86T96 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.07■■□□□ 1.44
RNF180Q86T96 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF180Q86T96 AC093827.2-201ENST00000512654 315 ntBASIC24.07■■□□□ 1.44
RNF180Q86T96 DET1-205ENST00000558413 583 ntTSL 4 BASIC24.07■■□□□ 1.44
RNF180Q86T96 ABCB10P4-201ENST00000566803 2184 ntBASIC24.07■■□□□ 1.44
RNF180Q86T96 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF180Q86T96 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF180Q86T96 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF180Q86T96 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.06■■□□□ 1.44
RNF180Q86T96 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.06■■□□□ 1.44
RNF180Q86T96 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF180Q86T96 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF180Q86T96 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF180Q86T96 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC24.06■■□□□ 1.44
RNF180Q86T96 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF180Q86T96 TERF1P5-201ENST00000477545 1207 ntBASIC24.06■■□□□ 1.44
RNF180Q86T96 AC079089.2-201ENST00000531211 1277 ntBASIC24.06■■□□□ 1.44
RNF180Q86T96 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.06■■□□□ 1.44
RNF180Q86T96 SLC7A5P1-201ENST00000568957 537 ntBASIC24.06■■□□□ 1.44
RNF180Q86T96 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms