Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 LINC00565-201ENST00000562710 2331 ntBASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP1BQ7LBR1 TSPY26P-201ENST00000476365 1326 ntBASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 AC010525.1-201ENST00000585559 441 ntBASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 AL117328.2-201ENST00000624617 1940 ntBASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CHMP1BQ7LBR1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CHMP1BQ7LBR1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP1BQ7LBR1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP1BQ7LBR1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.77■□□□□ 0.76
CHMP1BQ7LBR1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP1BQ7LBR1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP1BQ7LBR1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.77■□□□□ 0.76
CHMP1BQ7LBR1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CHMP1BQ7LBR1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CHMP1BQ7LBR1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP1BQ7LBR1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CHMP1BQ7LBR1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.77■□□□□ 0.76
CHMP1BQ7LBR1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHMP1BQ7LBR1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.77■□□□□ 0.75
CHMP1BQ7LBR1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 IGHV3-19-201ENST00000521488 291 ntBASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 AP005435.1-201ENST00000529293 1178 ntBASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 AC087239.1-201ENST00000622671 572 ntBASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 AC092068.2-201ENST00000590491 1708 ntBASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMP1BQ7LBR1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
CHMP1BQ7LBR1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP1BQ7LBR1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP1BQ7LBR1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMP1BQ7LBR1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CHMP1BQ7LBR1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP1BQ7LBR1 AC068587.7-201ENST00000641602 218 ntBASIC19.75■□□□□ 0.75
CHMP1BQ7LBR1 AC138932.1-201ENST00000534164 6830 ntBASIC19.75■□□□□ 0.75
CHMP1BQ7LBR1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP1BQ7LBR1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP1BQ7LBR1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CHMP1BQ7LBR1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP1BQ7LBR1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP1BQ7LBR1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CHMP1BQ7LBR1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 SLC25A24-204ENST00000569674 2357 ntBASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP1BQ7LBR1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms