Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00575Q6W349 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00575Q6W349 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00575Q6W349 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00575Q6W349 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00575Q6W349 LINC01006-201ENST00000333319 2292 ntBASIC13.67□□□□□ -0.22
LINC00575Q6W349 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00575Q6W349 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00575Q6W349 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LINC00575Q6W349 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00575Q6W349 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00575Q6W349 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00575Q6W349 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00575Q6W349 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00575Q6W349 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00575Q6W349 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00575Q6W349 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00575Q6W349 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LINC00575Q6W349 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00575Q6W349 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00575Q6W349 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00575Q6W349 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00575Q6W349 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00575Q6W349 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00575Q6W349 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00575Q6W349 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00575Q6W349 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00575Q6W349 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC00575Q6W349 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00575Q6W349 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00575Q6W349 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00575Q6W349 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00575Q6W349 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00575Q6W349 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00575Q6W349 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00575Q6W349 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00575Q6W349 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00575Q6W349 LONRF2P2-201ENST00000439212 571 ntBASIC13.66□□□□□ -0.22
LINC00575Q6W349 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00575Q6W349 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00575Q6W349 SRP68-213ENST00000629930 165 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00575Q6W349 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00575Q6W349 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00575Q6W349 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00575Q6W349 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LINC00575Q6W349 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00575Q6W349 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00575Q6W349 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00575Q6W349 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00575Q6W349 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00575Q6W349 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LINC00575Q6W349 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00575Q6W349 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00575Q6W349 RNF165-205ENST00000588679 2904 ntBASIC13.65□□□□□ -0.22
LINC00575Q6W349 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC00575Q6W349 AC007952.6-201ENST00000573168 2673 ntBASIC13.65□□□□□ -0.22
LINC00575Q6W349 AC003957.1-201ENST00000625108 2673 ntBASIC13.65□□□□□ -0.22
LINC00575Q6W349 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00575Q6W349 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00575Q6W349 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00575Q6W349 AC004448.1-201ENST00000458332 883 ntBASIC13.65□□□□□ -0.22
LINC00575Q6W349 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC00575Q6W349 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00575Q6W349 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00575Q6W349 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00575Q6W349 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00575Q6W349 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00575Q6W349 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00575Q6W349 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 LINC01529-204ENST00000636474 1715 ntBASIC13.64□□□□□ -0.23
LINC00575Q6W349 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00575Q6W349 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00575Q6W349 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
LINC00575Q6W349 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00575Q6W349 CA15P2-201ENST00000611168 834 ntBASIC13.64□□□□□ -0.23
LINC00575Q6W349 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00575Q6W349 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00575Q6W349 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00575Q6W349 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
LINC00575Q6W349 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00575Q6W349 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 ADM-207ENST00000530439 1839 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00575Q6W349 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00575Q6W349 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00575Q6W349 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00575Q6W349 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00575Q6W349 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms